RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 C1orf210Q8IVY1 113 aa9.44□□□□□ -0.9
RAB11FIP1-204ENST00000522774 NAXDQ8IW45 347 aa9.44□□□□□ -0.9
RAB11FIP1-204ENST00000522774 MARCH1Q8TCQ1 289 aa9.44□□□□□ -0.9
RAB11FIP1-204ENST00000522774 CASTOR1Q8WTX7 329 aa9.44□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ZC3H10Q96K80 434 aaKnown RBP9.44□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PIGQQ9BRB3 760 aa9.44□□□□□ -0.9
RAB11FIP1-204ENST00000522774 NARFLQ9H6Q4 476 aa9.44□□□□□ -0.9
RAB11FIP1-204ENST00000522774 RDH8Q9NYR8 311 aa9.44□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ZNF224Q9NZL3 707 aa9.44□□□□□ -0.9
RAB11FIP1-204ENST00000522774 COL27A1Q8IZC6 1860 aaPredicted RBP9.44□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PCSK5Q92824 1860 aa9.44□□□□□ -0.9
RAB11FIP1-204ENST00000522774 TECTAO75443 2155 aa9.44□□□□□ -0.9
RAB11FIP1-204ENST00000522774 TUBAL3A6NHL2 446 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 IFNA6P05013 189 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 GSTP1P09211 210 aaKnown RBP9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 RFPL3SP0C7P2 107 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PRF1P14222 555 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 MPGP29372 298 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 OTX1P32242 354 aaPredicted RBP9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ECH1Q13011 328 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 GK2Q14410 553 aaPredicted RBP9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ZMYND11Q15326 602 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SNAI3Q3KNW1 292 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SLC23A3Q6PIS1 610 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ZNF546Q86UE3 836 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ASB13Q8WXK3 278 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PDCD10Q9BUL8 212 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 REG4Q9BYZ8 158 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PLEK2Q9NYT0 353 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ANAPC10Q9UM13 185 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 V9GYS6 101 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 A0A0U1RQV5 110 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 STMND1H3BQB6 276 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 M0R135 149 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 MFNGO00587 321 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 EFSO43281 561 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 DHRS3O75911 302 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SPDEFO95238 335 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 VAMP1P23763 118 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PTGFRP43088 359 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 IL13RA1P78552 427 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ZXDAP98168 799 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 C20orf196Q8IYI0 205 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ARMC10Q8N2F6 343 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 LRRC20Q8TCA0 184 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SCARB1Q8WTV0 552 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 MITD1Q8WV92 249 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ZNF799Q96GE5 643 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PIGLQ9Y2B2 252 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 CELSR3Q9NYQ7 3312 aa9.43□□□□□ -0.9
RAB11FIP1-204ENST00000522774 hCG_1807616A0A1W2PRN6 198 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 TEX46H3BTG2 121 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 F10P00742 488 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 THBS4P35443 961 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 STARP49675 285 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SUCLG1P53597 346 aaKnown RBP9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PRSS12P56730 875 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SRSF4Q08170 494 aaKnown RBP9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 CCDC157Q569K6 752 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 RGS7BPQ6MZT1 257 aaPredicted RBP9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 TIPARPQ7Z3E1 657 aaKnown RBP9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 GGNQ86UU5 652 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 HOGA1Q86XE5 327 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 OR56B1Q8NGI3 324 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 OR51T1Q8NGJ9 327 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 OR14L1PQ8NHC6 308 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 RBPMSQ93062 196 aaKnown RBP9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PIGTQ969N2 578 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 FBXW5Q969U6 566 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 CCDC120Q96HB5 630 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 WDR13Q9H1Z4 485 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 TCFL5Q9UL49 500 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 LRRC3CA6NJW4 275 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 FAM25EA8MYX2 175 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 P04436 131 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 FCGR2AP12318 317 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ATP1B3P54709 279 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 RPS27AP62979 156 aaKnown RBP9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ATXN7L3Q14CW9 347 aaPredicted RBP9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 KCTD9Q7L273 389 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 TMEM105Q8N8V8 129 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 OR6K3Q8NGY3 331 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 OR2AE1Q8NHA4 323 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 PPP1R1CQ8WVI7 109 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 MAFIPQ8WZ33 124 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ROBO4Q8WZ75 1007 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 OR10A2Q9H208 303 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 GPR179Q6PRD1 2367 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 DOCK10Q96BY6 2186 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 CCDC187A0A096LP49 1063 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ZSCAN5BA6NJL1 495 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 RLN2P04090 185 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 MGMTP16455 207 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 TCN2P20062 427 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 TBPP20226 339 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SERPINA2P20848 420 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 CALCRP30988 508 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 SRD5A2P31213 254 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 NPY4RP50391 375 aa9.42□□□□□ -0.9
RAB11FIP1-204ENST00000522774 ZNF84P51523 738 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms