RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 DEFB121Q5J5C9 76 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 SLC35F1Q5T1Q4 408 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 ZBTB37Q5TC79 503 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 DUX4L9Q6RFH8 374 aaPredicted RBP9.41□□□□□ -0.9
MRPS28-206ENST00000520946 DCXRQ7Z4W1 244 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 FTMTQ8N4E7 242 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 OR1M1Q8NGA1 313 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 OR5D13Q8NGL4 314 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 OR2T4Q8NH00 348 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 MAP6Q96JE9 813 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 PAPOLGQ9BWT3 736 aaKnown RBP9.41□□□□□ -0.9
MRPS28-206ENST00000520946 OR52D1Q9H346 318 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 RANBP3Q9H6Z4 567 aaPredicted RBP9.41□□□□□ -0.9
MRPS28-206ENST00000520946 PNRC2Q9NPJ4 139 aaKnown RBP9.41□□□□□ -0.9
MRPS28-206ENST00000520946 SNTG1Q9NSN8 517 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 HAO2Q9NYQ3 351 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 DUX4Q9UBX2 424 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 CAPN7Q9Y6W3 813 aa9.41□□□□□ -0.9
MRPS28-206ENST00000520946 TRBV4-1A0A0J9YWV2 114 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 A0A1W2PPH5 198 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 TVP23AA6NH52 213 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 NDUFAB1O14561 156 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 CDIPTO14735 213 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 ARPC3O15145 178 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 IDH3BO43837 385 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 MPIG6BO95866 241 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 CD33P20138 364 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 CFL1P23528 166 aaKnown RBP9.4□□□□□ -0.9
MRPS28-206ENST00000520946 PYCR1P32322 319 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 GABRA2P47869 451 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 CAPZA1P52907 286 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 CSNK2BP67870 215 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 IL5RAQ01344 420 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 GFOD2Q3B7J2 385 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 WDR82Q6UXN9 313 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 ZBTB46Q86UZ6 589 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 FAM185AQ8N0U4 392 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 OR52L1Q8NGH7 329 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 PPP1R35Q8TAP8 253 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 RORBQ92753 470 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 RCN3Q96D15 328 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 DUS3LQ96G46 650 aaKnown RBP9.4□□□□□ -0.9
MRPS28-206ENST00000520946 HIST1H2AAQ96QV6 131 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 KCNJ15Q99712 375 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 KCTD14Q9BQ13 255 aaPredicted RBP9.4□□□□□ -0.9
MRPS28-206ENST00000520946 RTL8AQ9BWD3 113 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 AURKAIP1Q9NWT8 199 aaPredicted RBP9.4□□□□□ -0.9
MRPS28-206ENST00000520946 CMTM6Q9NX76 183 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 ADA2Q9NZK5 511 aa9.4□□□□□ -0.9
MRPS28-206ENST00000520946 hCG_1809904A0A1W2PP81 198 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 A0A1W2PPE2 198 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 A0A1W2PR64 198 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 A0A1W2PRV1 198 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 OR6C68A6NDL8 312 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 HMGB1P1B2RPK0 211 aaPredicted RBP9.39□□□□□ -0.91
MRPS28-206ENST00000520946 GADD45GO95257 159 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 APOC1P02654 83 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 NCK1P16333 377 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 FAHP16930 419 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 FMO3P31513 532 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 RPS27P42677 84 aaKnown RBP9.39□□□□□ -0.91
MRPS28-206ENST00000520946 ELF3P78545 371 aaPredicted RBP9.39□□□□□ -0.91
MRPS28-206ENST00000520946 SPIBQ01892 262 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.39□□□□□ -0.91
MRPS28-206ENST00000520946 LIAT1Q6ZQX7 453 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 NDUFA11Q86Y39 141 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 ZDHHC21Q8IVQ6 265 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 SLC15A3Q8IY34 581 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 FAM86B1Q8N7N1 296 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 Q8N7P7 452 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 CYB561A3Q8NBI2 242 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 PAPD5Q8NDF8 572 aaKnown RBP9.39□□□□□ -0.91
MRPS28-206ENST00000520946 CSNK2A3Q8NEV1 391 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 CFHR4Q92496 578 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 MCUR1Q96AQ8 359 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 PHF21AQ96BD5 680 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 SLAMF6Q96DU3 332 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 SEH1LQ96EE3 360 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 REEP6Q96HR9 211 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 HOPXQ9BPY8 73 aaPredicted RBP9.39□□□□□ -0.91
MRPS28-206ENST00000520946 DNTTIP1Q9H147 329 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 MMP28Q9H239 520 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 HEXA-AS1Q9H8Q6 139 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 SAR1AQ9NR31 198 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 ABCB10Q9NRK6 738 aa9.39□□□□□ -0.91
MRPS28-206ENST00000520946 SAMD4AQ9UPU9 718 aaKnown RBP9.39□□□□□ -0.91
MRPS28-206ENST00000520946 ZNF878C9JN71 531 aa9.38□□□□□ -0.91
MRPS28-206ENST00000520946 H3BUI4 141 aa9.38□□□□□ -0.91
MRPS28-206ENST00000520946 ZNF593O00488 134 aaPredicted RBP9.38□□□□□ -0.91
MRPS28-206ENST00000520946 FCN3O75636 299 aa9.38□□□□□ -0.91
MRPS28-206ENST00000520946 DIRAS1O95057 198 aa9.38□□□□□ -0.91
MRPS28-206ENST00000520946 TGM4P49221 684 aa9.38□□□□□ -0.91
MRPS28-206ENST00000520946 CX3CR1P49238 355 aa9.38□□□□□ -0.91
MRPS28-206ENST00000520946 FXYD6P3P58550 94 aa9.38□□□□□ -0.91
MRPS28-206ENST00000520946 GRB2P62993 217 aaKnown RBP9.38□□□□□ -0.91
MRPS28-206ENST00000520946 SEC23BQ15437 767 aa9.38□□□□□ -0.91
MRPS28-206ENST00000520946 ATPAF1Q5TC12 328 aaPredicted RBP9.38□□□□□ -0.91
MRPS28-206ENST00000520946 SLC16A9Q7RTY1 509 aa9.38□□□□□ -0.91
MRPS28-206ENST00000520946 C11orf53Q8IXP5 236 aa9.38□□□□□ -0.91
MRPS28-206ENST00000520946 TIGD4Q8IY51 512 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms