RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 SEC14L4Q9UDX3 406 aa3.31□□□□□ -1.88
CLK4-207ENST00000520909 KLHL21Q9UJP4 597 aa3.31□□□□□ -1.88
CLK4-207ENST00000520909 BLOC1S6Q9UL45 172 aa3.31□□□□□ -1.88
CLK4-207ENST00000520909 NPIPA1Q9UND3 350 aa3.31□□□□□ -1.88
CLK4-207ENST00000520909 BAIAP2Q9UQB8 552 aa3.31□□□□□ -1.88
CLK4-207ENST00000520909 TRAPPC4Q9Y296 219 aa3.31□□□□□ -1.88
CLK4-207ENST00000520909 MRPS18CQ9Y3D5 142 aaKnown RBP3.31□□□□□ -1.88
CLK4-207ENST00000520909 RPL36Q9Y3U8 105 aaKnown RBP3.31□□□□□ -1.88
CLK4-207ENST00000520909 SPTA1P02549 2419 aa3.31□□□□□ -1.88
CLK4-207ENST00000520909 ZFHX4Q86UP3 3567 aa3.31□□□□□ -1.88
CLK4-207ENST00000520909 EML6Q6ZMW3 1958 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 EXPH5Q8NEV8 1989 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 LOC400499M0QZD8 3231 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 TRGV5A0A0B4J1U4 118 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 IGHV3-15A0A0B4J1V0 119 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 A6NIZ1 184 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 SNTNA6NMZ2 147 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 K7EM74 188 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 M0R3G1 203 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 XKRYO14609 159 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 IMPA2O14732 288 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 ARPC3O15145 178 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 CXCL13O43927 109 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 EIF1BO60739 113 aaKnown RBP3.3□□□□□ -1.88
CLK4-207ENST00000520909 PAGE4O60829 102 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 SYNGR4O95473 234 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 TXNDC12O95881 172 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 RENP00797 406 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 MT-ND2P03891 347 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 HPNP05981 417 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 STSP08842 583 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 TSPAN19P0C672 248 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 DUX4L4P0CJ87 422 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 SMIM18P0DKX4 95 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 ZNF24P17028 368 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 KLK2P20151 261 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 HTR1FP30939 366 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 PYCR1P32322 319 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 ATP6V1E1P36543 226 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 ACVR1BP36896 505 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 NKX2-1P43699 371 aaPredicted RBP3.3□□□□□ -1.88
CLK4-207ENST00000520909 MAP2K4P45985 399 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 LHX2P50458 406 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 CLDN15P56746 228 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 GABARAPL2P60520 117 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 RAP1BP61224 184 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 RPL27P61353 136 aaKnown RBP3.3□□□□□ -1.88
CLK4-207ENST00000520909 RAP1AP62834 184 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 LGALS3BPQ08380 585 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 ST3GAL4Q11206 333 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 ZP4Q12836 540 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 KRR1Q13601 381 aaKnown RBP3.3□□□□□ -1.88
CLK4-207ENST00000520909 APOFQ13790 326 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 CRMP1Q14194 572 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 MELKQ14680 651 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 ACKR1Q16570 336 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 HYAL4Q2M3T9 481 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 MS4A18Q3C1V0 323 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 KLHL12Q53G59 568 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 AADACL4Q5VUY2 407 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 GPR139Q6DWJ6 353 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 TMEM225Q6GV28 225 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 LEG1Q6P5S2 330 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 ZNF773Q6PK81 442 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 IGFL3Q6UXB1 125 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 B3GLCTQ6Y288 498 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 AHSA2Q719I0 299 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 SLC35D2Q76EJ3 337 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 CHMP1BQ7LBR1 199 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 FAM122BQ7Z309 247 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 PXKQ7Z7A4 578 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 GID4Q8IVV7 300 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 STX19Q8N4C7 294 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 ARIH2OSQ8N7S6 290 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 LRRC75AQ8NAA5 344 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 SLC37A3Q8NCC5 494 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 NAXEQ8NCW5 288 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 NPEPL1Q8NDH3 523 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 SDR9C7Q8NEX9 313 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 OR9Q1Q8NGQ5 310 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 OR10D3Q8NH80 312 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 ROBO4Q8WZ75 1007 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 GTF3AQ92664 365 aaKnown RBP3.3□□□□□ -1.88
CLK4-207ENST00000520909 GGHQ92820 318 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 PTP4A1Q93096 173 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 MYDGFQ969H8 173 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 OXGR1Q96P68 337 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 TSPAN32Q96QS1 320 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 GPX7Q96SL4 187 aaPredicted RBP3.3□□□□□ -1.88
CLK4-207ENST00000520909 NMNAT3Q96T66 252 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 COPS4Q9BT78 406 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 HCAR1Q9BXC0 346 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 SRXN1Q9BYN0 137 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 TXNIPQ9H3M7 391 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 FN3KQ9H479 309 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 DUSP21Q9H596 190 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 RERGLQ9H628 205 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 ACKR4Q9NPB9 350 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 TIGARQ9NQ88 270 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 PAK1IP1Q9NWT1 392 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms