RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 OR6C76A6NM76 312 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 SEMA7AO75326 666 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 IGHV4-34P06331 123 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 OR13C7P0DN81 318 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 FCGR2CP31995 323 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 EDDM3AQ14507 147 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 PTPMT1Q8WUK0 201 aaPredicted RBP10.46□□□□□ -0.73
SYNPO-204ENST00000519664 FBLIM1Q8WUP2 373 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 CPNE4Q96A23 557 aaPredicted RBP10.46□□□□□ -0.73
SYNPO-204ENST00000519664 APH1AQ96BI3 265 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 LIN37Q96GY3 246 aaPredicted RBP10.46□□□□□ -0.73
SYNPO-204ENST00000519664 ARHGAP5-AS1Q96IT6 56 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 BCO1Q9HAY6 547 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 GCM1Q9NP62 436 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 GNG12Q9UBI6 72 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 ZNF223Q9UK11 482 aaPredicted RBP10.46□□□□□ -0.73
SYNPO-204ENST00000519664 GATCO43716 136 aaKnown RBP10.46□□□□□ -0.73
SYNPO-204ENST00000519664 EPPINO95925 133 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 RD3LP0DJH9 198 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 LIMS1P48059 325 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 DHRS2Q13268 280 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 RTL6Q6ICC9 239 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 CDH26Q8IXH8 852 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 SLC22A18ASQ8N1D0 253 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 SLC38A9Q8NBW4 561 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 OR5B12Q96R08 314 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 TMEM74BQ9NUR3 256 aa10.46□□□□□ -0.73
SYNPO-204ENST00000519664 TNFSF14O43557 240 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 CD96P40200 585 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.46□□□□□ -0.74
SYNPO-204ENST00000519664 SPATA46Q5T0L3 261 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 ADAM5Q6NVV9 412 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 ANKRD16Q6P6B7 361 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 SP7Q8TDD2 431 aaPredicted RBP10.46□□□□□ -0.74
SYNPO-204ENST00000519664 FRZBQ92765 325 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 DOCK7Q96N67 2140 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 PILRAQ9UKJ1 303 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 ELF5Q9UKW6 265 aaPredicted RBP10.46□□□□□ -0.74
SYNPO-204ENST00000519664 ST3GAL6Q9Y274 331 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 FBXO7Q9Y3I1 522 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 EPOPA6NHQ4 379 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 FAM157BP0CG42 384 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 GLULP15104 373 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 ZNF561Q8N587 486 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 EXD3Q8N9H8 876 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 OR11H7Q8NGC8 314 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 SEH1LQ96EE3 360 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 CNTD2Q9H8S5 307 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 PLA2G3Q9NZ20 509 aa10.46□□□□□ -0.74
SYNPO-204ENST00000519664 ANKUB1A6NFN9 424 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 NUDT19A8MXV4 375 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 TRIM77I1YAP6 450 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 PLPP3O14495 311 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 OGG1O15527 345 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 SMIM6P0DI80 62 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 RPS2P15880 293 aaKnown RBP10.45□□□□□ -0.74
SYNPO-204ENST00000519664 EFNB2P52799 333 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 PPP1R1AQ13522 171 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 ZNF273Q14593 569 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 SOHLH1Q5JUK2 328 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 HSD17B13Q7Z5P4 300 aaPredicted RBP10.45□□□□□ -0.74
SYNPO-204ENST00000519664 HAS2Q92819 552 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 REEP6Q96HR9 211 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 KCNJ15Q99712 375 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 MENTQ9BUN1 341 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 NECAP2Q9NVZ3 263 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 KLHDC2Q9Y2U9 406 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 OR4C45A6NMZ5 311 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 ZNF705GA8MUZ8 300 aaPredicted RBP10.45□□□□□ -0.74
SYNPO-204ENST00000519664 H3BP45 60 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 IFNA1P01562 189 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 CNR1P21554 472 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 GALP22466 123 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 ASCL1P50553 236 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 FBXL14Q8N1E6 418 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 OR56B2PQ8NGI1 322 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 TWSG1Q9GZX9 223 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 PURGQ9UJV8 347 aaKnown RBP10.45□□□□□ -0.74
SYNPO-204ENST00000519664 PCOLCE2Q9UKZ9 415 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 TP53TG5Q9Y2B4 290 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 SLCO1B1Q9Y6L6 691 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 MEIKINA0A087WXM9 373 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 MED19A0JLT2 244 aaPredicted RBP10.45□□□□□ -0.74
SYNPO-204ENST00000519664 OR5H15A6NDH6 313 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 ARGFXA6NJG6 315 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 CLDN1O95832 211 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 AKR1C3P42330 323 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 RAB4BP61018 213 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 FZD5Q13467 585 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 TESK1Q15569 626 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 SLC25A30Q5SVS4 291 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 WDR5BQ86VZ2 330 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 LGI3Q8N145 548 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 DEFB123Q8N688 67 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 SFT2D1Q8WV19 159 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 HAO2Q9NYQ3 351 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 TP53BP1Q12888 1972 aaPredicted RBP10.45□□□□□ -0.74
SYNPO-204ENST00000519664 DSPPQ9NZW4 1301 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 ACTL6BO94805 426 aa10.45□□□□□ -0.74
SYNPO-204ENST00000519664 HOXC4P09017 264 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 260.1 ms