RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 OR52I2Q8NH67 350 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 VKORC1Q9BQB6 163 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 METTL17Q9H7H0 456 aaPredicted RBP12.58□□□□□ -0.4
CLN8-204ENST00000519254 PLEKHA1Q9HB21 404 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 MEMO1Q9Y316 297 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 CACNG2Q9Y698 323 aa12.58□□□□□ -0.4
CLN8-204ENST00000519254 GGT3PA6NGU5 568 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 GABARAPH6UMI1 98 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 CCL21O00585 134 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 DHRS3O75911 302 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 KDM4BO94953 1096 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 HLA-HP01893 362 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 HNRNPCP07910 306 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLN8-204ENST00000519254 CD79AP11912 226 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 BTCP35070 178 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 OPRM1P35372 400 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 TGFBR3Q03167 851 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 PABPC1L2AQ5JQF8 200 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 DNM1P46Q6ZS02 220 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 KRT74Q7RTS7 529 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 CXorf67Q86X51 503 aaPredicted RBP12.57□□□□□ -0.4
CLN8-204ENST00000519254 TOMM5Q8N4H5 51 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 CPEB3Q8NE35 698 aaKnown RBP12.57□□□□□ -0.4
CLN8-204ENST00000519254 UQCC2Q9BRT2 126 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 OR10A2Q9H208 303 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 RNF121Q9H920 327 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 NLKQ9UBE8 527 aa12.57□□□□□ -0.4
CLN8-204ENST00000519254 INTS1Q8N201 2190 aaKnown RBP12.57□□□□□ -0.4
CLN8-204ENST00000519254 IGKV1-9A0A0C4DH69 117 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 FAM240BA0A1B0GVZ2 78 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 BOLA2-SMG1P6H3BVE0 249 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 CNOT4O95628 575 aaKnown RBP12.56□□□□□ -0.4
CLN8-204ENST00000519254 ERCC1P07992 297 aaPredicted RBP12.56□□□□□ -0.4
CLN8-204ENST00000519254 SLC6A1P30531 599 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 GDNFP39905 211 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 KLF9Q13886 244 aaPredicted RBP12.56□□□□□ -0.4
CLN8-204ENST00000519254 TMEM211Q6ICI0 200 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 BEND4Q6ZU67 534 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 GABRG1Q8N1C3 465 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 SSC4DQ8WTU2 575 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 RND1Q92730 232 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 DMRTA2Q96SC8 542 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 RBMX2Q9Y388 322 aaKnown RBP12.56□□□□□ -0.4
CLN8-204ENST00000519254 A0A1W2PR80 420 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 MEIOCA2RUB1 952 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 ZNF503-AS2A6NEH8 195 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 PRB1P04280 392 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 THBS4P35443 961 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 MRPS10P82664 201 aaKnown RBP12.56□□□□□ -0.4
CLN8-204ENST00000519254 QRFPP83859 136 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 TBRG1Q3YBR2 411 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 PLA1AQ53H76 456 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 OR10K2Q6IF99 312 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 FJX1Q86VR8 437 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 OR2AE1Q8NHA4 323 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 C15orf40Q8WUR7 153 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 CHAC2Q8WUX2 184 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 FCAMRQ8WWV6 532 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 BCL2L2Q92843 193 aaPredicted RBP12.56□□□□□ -0.4
CLN8-204ENST00000519254 PTX4Q96A99 478 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 ITPKCQ96DU7 683 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 BBC3Q96PG8 261 aaPredicted RBP12.56□□□□□ -0.4
CLN8-204ENST00000519254 SPACA5Q96QH8 159 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 ATG5Q9H1Y0 275 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 DIABLOQ9NR28 239 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 ETAA1Q9NY74 926 aa12.56□□□□□ -0.4
CLN8-204ENST00000519254 MYEF2Q9P2K5 600 aaKnown RBP12.56□□□□□ -0.4
CLN8-204ENST00000519254 COL6A6A6NMZ7 2263 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 RP1L1Q8IWN7 2480 aaPredicted RBP12.55□□□□□ -0.4
CLN8-204ENST00000519254 A0A0B4J293 547 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 LCATP04180 440 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 ALDOBP05062 364 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 FAHP16930 419 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 COX5AP20674 150 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 ZNF93P35789 620 aaPredicted RBP12.55□□□□□ -0.4
CLN8-204ENST00000519254 TLE1Q04724 770 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 IGFBP7Q16270 282 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 AGAP6Q5VW22 663 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 ZNF474Q6S9Z5 364 aaPredicted RBP12.55□□□□□ -0.4
CLN8-204ENST00000519254 PLET1Q6UQ28 207 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 LIX1LQ8IVB5 337 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 CDH26Q8IXH8 852 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 PAQR4Q8N4S7 273 aaPredicted RBP12.55□□□□□ -0.4
CLN8-204ENST00000519254 CCDC54Q8NEL0 328 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 B3GNT2Q9NY97 397 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 KLK11Q9UBX7 282 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 ATPIF1Q9UII2 106 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 PIGLQ9Y2B2 252 aa12.55□□□□□ -0.4
CLN8-204ENST00000519254 TRAV18A0A075B6X5 111 aa12.54□□□□□ -0.4
CLN8-204ENST00000519254 LOC100509620A0A075B734 347 aa12.54□□□□□ -0.4
CLN8-204ENST00000519254 MTRF1O75570 445 aaKnown RBP12.54□□□□□ -0.4
CLN8-204ENST00000519254 BPNT1O95861 308 aa12.54□□□□□ -0.4
CLN8-204ENST00000519254 RAB6AP20340 208 aa12.54□□□□□ -0.4
CLN8-204ENST00000519254 ACKR3P25106 362 aa12.54□□□□□ -0.4
CLN8-204ENST00000519254 HOXC12P31275 282 aa12.54□□□□□ -0.4
CLN8-204ENST00000519254 CAPZA1P52907 286 aa12.54□□□□□ -0.4
CLN8-204ENST00000519254 UBE2NP61088 152 aaKnown RBP12.54□□□□□ -0.4
CLN8-204ENST00000519254 UNC119Q13432 240 aa12.54□□□□□ -0.4
CLN8-204ENST00000519254 TNK1Q13470 666 aa12.54□□□□□ -0.4
CLN8-204ENST00000519254 DYRK1AQ13627 763 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms