RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 FCN1O00602 326 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 PLPP3O14495 311 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 SIVA1O15304 175 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 SLC31A1O15431 190 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 NDUFA2O43678 99 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 PRKAB2O43741 272 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 FADS1O60427 444 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 HPGDSO60760 199 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 GLSO94925 669 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 DIRAS1O95057 198 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 LYPLA2O95372 231 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 PLEKHA8P1O95397 391 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 HLA-AP01891 365 aaKnown RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 ORM1P02763 201 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 P04436 131 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 CDK1P06493 297 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 GP1BAP07359 652 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 ZDHHC11BP0C7U3 371 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 COX5BP10606 129 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 HIST1H1CP16403 213 aaKnown RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 FUT3P21217 361 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 WARSP23381 471 aaKnown RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 HMGB2P26583 209 aaKnown RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 OR1E1P30953 314 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 HPCAL1P37235 193 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 CYB561P49447 251 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 SRP9P49458 86 aaKnown RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 PRKXP51817 358 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 PKNOX1P55347 436 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 ERVS71-1P61550 626 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 MRPS22P82650 360 aaKnown RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 RPL19P84098 196 aaKnown RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 TFAMQ00059 246 aaKnown RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 FLI1Q01543 452 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 EWSR1Q01844 656 aaKnown RBP eCLIP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 BNIP2Q12982 314 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 PSG7Q13046 419 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 SRSF6Q13247 344 aaKnown RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 SF3A2Q15428 464 aaKnown RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 SLC9A3R2Q15599 337 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 TOMM34Q15785 309 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 TMEM176BQ3YBM2 270 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 KLHL12Q53G59 568 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 ADNP2Q6IQ32 1131 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 ZNF836Q6ZNA1 936 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 C19orf35Q6ZS72 473 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 NIPA1Q7RTP0 329 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 DPPA2Q7Z7J5 298 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 UNC93AQ86WB7 457 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 CLVS1Q8IUQ0 354 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 SLC34A3Q8N130 599 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 CDRT4Q8N9R6 151 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 SDR9C7Q8NEX9 313 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 NOXO1Q8NFA2 376 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 PXT1Q8NFP0 134 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 OR52I1Q8NGK6 324 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 OR52N1Q8NH53 320 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 OR51A7Q8NH64 312 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 CXorf40AQ8TE69 158 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 RNF138Q8WVD3 245 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 RASSF5Q8WWW0 418 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 RORBQ92753 470 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 UBE2E3Q969T4 207 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 PTH2Q96A98 100 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 TIMD4Q96H15 378 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 CENPNQ96H22 339 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 CNN2Q99439 309 aaKnown RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 PHB2Q99623 299 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 ECSITQ9BQ95 431 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 ZNF2Q9BSG1 426 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 RNF126Q9BV68 326 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 TMED9Q9BVK6 235 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 DDA1Q9BW61 102 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 RAB34Q9BZG1 259 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 OR51J1Q9H342 316 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 NIPAL2Q9H841 368 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 EML4Q9HC35 981 aaKnown RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 SH2D2AQ9NP31 389 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 ABCB9Q9NP78 766 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 MYOZ1Q9NP98 299 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 SLC17A5Q9NRA2 495 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 FBXO8Q9NRD0 319 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 SPANXA1Q9NS26 97 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 TAS2R1Q9NYW7 299 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 RAB26Q9ULW5 256 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 ALG6Q9Y672 507 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 USH1CQ9Y6N9 552 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 CLIP1P30622 1438 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 BLMP54132 1417 aaPredicted RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 GLI3P10071 1580 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 NRKQ7Z2Y5 1582 aa2.48□□□□□ -2.01
VPS13B-207ENST00000518569 GOLGB1Q14789 3259 aaKnown RBP2.48□□□□□ -2.01
VPS13B-207ENST00000518569 MEGF6O75095 1541 aa2.47□□□□□ -2.01
VPS13B-207ENST00000518569 ASXL1Q8IXJ9 1541 aa2.47□□□□□ -2.01
VPS13B-207ENST00000518569 ADGRA3Q8IWK6 1321 aa2.47□□□□□ -2.01
VPS13B-207ENST00000518569 NKTRP30414 1462 aaKnown RBP2.47□□□□□ -2.01
VPS13B-207ENST00000518569 NCOA2Q15596 1464 aa2.47□□□□□ -2.01
VPS13B-207ENST00000518569 A0A1B0GVI7 797 aa2.47□□□□□ -2.01
VPS13B-207ENST00000518569 SLC5A10A0PJK1 596 aa2.47□□□□□ -2.01
VPS13B-207ENST00000518569 PINLYPA6NC86 204 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 334.4 ms