RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SSX3Q99909 188 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 SLC25A31Q9H0C2 315 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 PARP12Q9H0J9 701 aaKnown RBP9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 HEXA-AS1Q9H8Q6 139 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 NDRG3Q9UGV2 375 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 MRM2Q9UI43 246 aaKnown RBP9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 COLQQ9Y215 455 aaPredicted RBP9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 FBXO7Q9Y3I1 522 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 IGHV1OR21-1A0A087WYE8 117 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 TNFSF15O95150 251 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 PTAFRP25105 342 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 PEBP1P30086 187 aaKnown RBP9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZNF74Q16587 644 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 EIF2S3LQ2VIR3 472 aaKnown RBP9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 TMEM255AQ5JRV8 349 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR6K3Q8NGY3 331 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 GPBAR1Q8TDU6 330 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 C3orf49Q96BT1 292 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZNF75AQ96N20 296 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 MMP25Q9NPA2 562 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 LUZP4Q9P127 313 aa9.71□□□□□ -0.85
PCDHGA1-202ENST00000517417 SLC17A2O00624 439 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 IMPA2O14732 288 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 MFGE8Q08431 387 aaPredicted RBP9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 PDZK1IP1Q13113 114 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 SEZ6L2Q6UXD5 910 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 KMT5CQ86Y97 462 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 SFTPA2Q8IWL1 248 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR4S1Q8NGB4 309 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR4D10Q8NGI6 311 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 FRZBQ92765 325 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 SPACA9Q96E40 222 aaPredicted RBP9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 MRGPRX4Q96LA9 322 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 S1PR5Q9H228 398 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 TMEM100Q9NV29 134 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 CDH23Q9H251 3354 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 C5orf49A4QMS7 147 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 TNFSF11O14788 317 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 FKBP2P26885 142 aaKnown RBP9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 GPR3P46089 330 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 FMODQ06828 376 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 MZT1Q08AG7 82 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 SLC10A1Q14973 349 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 ETFDHQ16134 617 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 FAM213BQ8TBF2 198 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 TAAR8Q969N4 342 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 CDX2Q99626 313 aaPredicted RBP9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 SMOC1Q9H4F8 434 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 FSCN3Q9NQT6 498 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 GFOD1Q9NXC2 390 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 FRRS1LQ9P0K9 344 aa9.71□□□□□ -0.86
PCDHGA1-202ENST00000517417 TRAV8-7A0A075B6U6 113 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 ZNF117Q03924 483 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 MSMO1Q15800 293 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 WDR38Q5JTN6 314 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 PRSS35Q8N3Z0 413 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 OXGR1Q96P68 337 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 SUCNR1Q9BXA5 334 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 AICDAQ9GZX7 198 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 ZCCHC4Q9H5U6 513 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 THSD7BQ9C0I4 1608 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 RAB27BO00194 218 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 PIN1P1O15428 100 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 WNT11O96014 354 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 SERPINA7P05543 415 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 GNB3P16520 340 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 AVPR2P30518 371 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 SERPINF1P36955 418 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 MRPS34P82930 218 aaKnown RBP9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 DHRS2Q13268 280 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 TMEM229BQ8NBD8 167 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR10G3Q8NGC4 313 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR10AC1Q8NH08 325 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 EMG1Q92979 244 aaKnown RBP9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 C10orf90Q96M02 699 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 RSPO3Q9BXY4 272 aaPredicted RBP9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 CHST6Q9GZX3 395 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 PBOV1Q9GZY1 135 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 BCO1Q9HAY6 547 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 NPDC1Q9NQX5 325 aaPredicted RBP9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 TIMM10BQ9Y5J6 103 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 IGHV1OR15-9A0A0B4J2B8 117 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 TMEM272A0A1B0GTI8 110 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 DHHO43323 396 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 SNCAP37840 140 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 S100A12P80511 92 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 SSBP1Q04837 148 aaKnown RBP9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 PDLIM3Q53GG5 364 aaPredicted RBP9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 LYG2Q86SG7 212 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 SUMF2Q8NBJ7 301 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR14K1Q8NGZ2 314 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 RBMXL1Q96E39 390 aaKnown RBP9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 NPAS1Q99742 590 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 RAB9BQ9NP90 201 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 GDF2Q9UK05 429 aaPredicted RBP9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 SULT1C2O00338 296 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 CLDN1O95832 211 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 SLC25A1P53007 311 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 CATR1Q13166 79 aa9.7□□□□□ -0.86
PCDHGA1-202ENST00000517417 OR10Z1Q8NGY1 313 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms