RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 MMP28Q9H239 520 aa4.71□□□□□ -1.66
SCARNA20.4-201ENST00000516969 C12orf49Q9H741 205 aa4.71□□□□□ -1.66
SCARNA20.4-201ENST00000516969 RNF121Q9H920 327 aa4.71□□□□□ -1.66
SCARNA20.4-201ENST00000516969 NOX3Q9HBY0 568 aa4.71□□□□□ -1.66
SCARNA20.4-201ENST00000516969 PLSCR4Q9NRQ2 329 aa4.71□□□□□ -1.66
SCARNA20.4-201ENST00000516969 NPAP1Q9NZP6 1156 aa4.71□□□□□ -1.66
SCARNA20.4-201ENST00000516969 KLK11Q9UBX7 282 aa4.71□□□□□ -1.66
SCARNA20.4-201ENST00000516969 MTFP1Q9UDX5 166 aa4.71□□□□□ -1.66
SCARNA20.4-201ENST00000516969 PIGLQ9Y2B2 252 aa4.71□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CACNG2Q9Y698 323 aa4.71□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CACNA1DQ01668 2161 aa4.71□□□□□ -1.66
SCARNA20.4-201ENST00000516969 SHANK1Q9Y566 2161 aa4.71□□□□□ -1.66
SCARNA20.4-201ENST00000516969 NCOR2Q9Y618 2525 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TRAV18A0A075B6X5 111 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 FAM240BA0A1B0GVZ2 78 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 ANKRD20A5PA0PJZ0 165 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 METTL21EPA6NDL7 271 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 WIPF3A6NGB9 483 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 DLL1O00548 723 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TNFSF13O75888 250 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 ECDO95905 644 aaPredicted RBP4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 SERPINA5P05154 406 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CRHP06850 196 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 MELTFP08582 738 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 GSTT2BP0CG30 244 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 UBBP0CG47 229 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CD79AP11912 226 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 PTHLHP12272 177 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 COX5AP20674 150 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 PTGER4P35408 488 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 PTGFRP43088 359 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 OR3A4PP47883 348 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 INPP1P49441 399 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 AP3S2P59780 193 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 ZP1P60852 638 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 BTG1P62324 171 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TGFBR3Q03167 851 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 PLP2Q04941 152 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 PMPCAQ10713 525 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 SNTB2Q13425 540 aaKnown RBP4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 SF3B4Q15427 424 aaKnown RBP eCLIP4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 KISS1Q15726 138 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 MOGAT2Q3SYC2 334 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TBRG1Q3YBR2 411 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 ZNF260Q3ZCT1 412 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 HIKESHIQ53FT3 197 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CLVS2Q5SYC1 327 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 AGAP6Q5VW22 663 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 OLFML2AQ68BL7 652 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 RTL6Q6ICC9 239 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 OR2A2Q6IF42 318 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 OR10K2Q6IF99 312 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 MTFR2Q6P444 385 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 PLET1Q6UQ28 207 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 GLIPR1L1Q6UWM5 242 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 ASCL4Q6XD76 172 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 C1QL2Q7Z5L3 287 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CDH24Q86UP0 819 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 GLCCI1Q86VQ1 547 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 FAM89BQ8N5H3 189 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 OR6K3Q8NGY3 331 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 OR2AE1Q8NHA4 323 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 KCNG3Q8TAE7 436 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 ENKURQ8TC29 256 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 GPX8Q8TED1 209 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 UBASH3BQ8TF42 649 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 AQP3Q92482 292 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 GCDHQ92947 438 aaPredicted RBP4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 APOBEC3DQ96AK3 386 aaPredicted RBP4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CREB3L1Q96BA8 519 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 SPSB1Q96BD6 273 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 STARD4Q96DR4 205 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 SEH1LQ96EE3 360 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 SPACA5Q96QH8 159 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 AUNIPQ9H7T9 357 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 HRASLSQ9HDD0 168 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 MYEF2Q9P2K5 600 aaKnown RBP4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 NLKQ9UBE8 527 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 GHRLQ9UBU3 117 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 MRPS28Q9Y2Q9 187 aaKnown RBP4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 NBASA2RRP1 2371 aa4.7□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CHD3Q12873 2000 aaKnown RBP4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 IGKV1-27A0A075B6S5 117 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 A0A0A6YYD4 124 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 A0A0B4J293 547 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 ZNF816-ZNF321PA0A0X1KG74 233 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 C5orf49A4QMS7 147 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 NAP1L6A6NFF2 107 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CENPXA8MT69 81 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 RRP8O43159 456 aaKnown RBP4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 ICMTO60725 284 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CDC14BO60729 498 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 WDR1O75083 606 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 RBBP9O75884 186 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 SCGNO76038 276 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 TOXO94900 526 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 CST4P01036 141 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 NRASP01111 189 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 NGFP01138 241 aa4.69□□□□□ -1.66
SCARNA20.4-201ENST00000516969 MT-ND4P03905 459 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms