RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ARRDC3Q96B67 414 aa11.4□□□□□ -0.58
SMAD1-215ENST00000515385 CMBLQ96DG6 245 aa11.4□□□□□ -0.58
SMAD1-215ENST00000515385 FAM122AQ96E09 287 aa11.4□□□□□ -0.58
SMAD1-215ENST00000515385 TSPAN32Q96QS1 320 aa11.4□□□□□ -0.58
SMAD1-215ENST00000515385 NKX3-1Q99801 234 aaPredicted RBP11.4□□□□□ -0.58
SMAD1-215ENST00000515385 PARP12Q9H0J9 701 aaKnown RBP11.4□□□□□ -0.58
SMAD1-215ENST00000515385 OR51B6Q9H340 312 aa11.4□□□□□ -0.58
SMAD1-215ENST00000515385 DKKL1Q9UK85 242 aa11.4□□□□□ -0.58
SMAD1-215ENST00000515385 PCNTO95613 3336 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.39□□□□□ -0.59
SMAD1-215ENST00000515385 ZNF727A8MUV8 499 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 M0R143 59 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 HSD17B6O14756 317 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 DFFBO76075 338 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 TIMP1P01033 207 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 METTL15P1P0C7V9 234 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 GZMBP10144 247 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 HOXC12P31275 282 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 AKT2P31751 481 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 MRPS11P82912 194 aaKnown RBP11.39□□□□□ -0.59
SMAD1-215ENST00000515385 CDK3Q00526 305 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 EXOSC7Q15024 291 aaKnown RBP11.39□□□□□ -0.59
SMAD1-215ENST00000515385 RNF44Q7L0R7 432 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 TMEM183AQ8IXX5 376 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 CTHRC1Q96CG8 243 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 FAM210BQ96KR6 192 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 G6PC3Q9BUM1 346 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 SLC46A2Q9BY10 475 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 SMIM3Q9BZL3 60 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 GAL3ST2Q9H3Q3 398 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 CNTD2Q9H8S5 307 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 TMEM242Q9NWH2 141 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 B3GALT5Q9Y2C3 310 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 MRPS18CQ9Y3D5 142 aaKnown RBP11.39□□□□□ -0.59
SMAD1-215ENST00000515385 HS3ST3B1Q9Y662 390 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 R4GMQ9 66 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 CDRT15L2A8MXV6 281 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 HSBP1L1C9JCN9 74 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 FTCDNL1E5RQL4 147 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 OR6A2O95222 327 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 CSTAP01040 98 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 SNRPCP09234 159 aaKnown RBP11.39□□□□□ -0.59
SMAD1-215ENST00000515385 FOLR1P15328 257 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 ZNF25P17030 456 aaPredicted RBP11.39□□□□□ -0.59
SMAD1-215ENST00000515385 ERVFRD-1P60508 538 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 DLK1P80370 383 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 MFGE8Q08431 387 aaPredicted RBP11.39□□□□□ -0.59
SMAD1-215ENST00000515385 SGCGQ13326 291 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 UNC119Q13432 240 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 ENPP2Q13822 863 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 WBP2NLQ6ICG8 309 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 FOXRED2Q8IWF2 684 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 DOCK3Q8IZD9 2030 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 CRIPAKQ8N1N5 446 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 ABHD5Q8WTS1 349 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 FRZBQ92765 325 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 NIPSNAP3BQ9BS92 247 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 MMP25Q9NPA2 562 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 OR52A1Q9UKL2 312 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 C14orf166Q9Y224 244 aaKnown RBP11.39□□□□□ -0.59
SMAD1-215ENST00000515385 OSGIN2Q9Y236 505 aa11.39□□□□□ -0.59
SMAD1-215ENST00000515385 TGIF2-C20orf24A0A0A6YYL0 155 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 CCDC163A0A0D9SF12 145 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 SERINC4A6NH21 518 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 K7N7A8 449 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 MASP2O00187 686 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 GGCTO75223 188 aaKnown RBP11.38□□□□□ -0.59
SMAD1-215ENST00000515385 HLA-DQA2P01906 255 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 HSPB1P04792 205 aaKnown RBP11.38□□□□□ -0.59
SMAD1-215ENST00000515385 RPS27P42677 84 aaKnown RBP11.38□□□□□ -0.59
SMAD1-215ENST00000515385 TAS2R46P59540 309 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 RPL18Q07020 188 aaKnown RBP11.38□□□□□ -0.59
SMAD1-215ENST00000515385 ZNF429Q86V71 674 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 CACUL1Q86Y37 369 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 SGPP2Q8IWX5 399 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 STT3BQ8TCJ2 826 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 WFIKKN2Q8TEU8 576 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 C8orf44Q96CB5 159 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 SHDQ96IW2 340 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 LPAR4Q99677 370 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 OR14J1Q9UGF5 321 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 SLC5A6Q9Y289 635 aa11.38□□□□□ -0.59
SMAD1-215ENST00000515385 LOC107986453A0A1B0GWG9 222 aa11.37□□□□□ -0.59
SMAD1-215ENST00000515385 TMEM14DPA8MWL7 114 aa11.37□□□□□ -0.59
SMAD1-215ENST00000515385 GRXCR1A8MXD5 290 aa11.37□□□□□ -0.59
SMAD1-215ENST00000515385 H7C1C5 153 aa11.37□□□□□ -0.59
SMAD1-215ENST00000515385 XKRYO14609 159 aa11.37□□□□□ -0.59
SMAD1-215ENST00000515385 SRP19P09132 144 aaKnown RBP11.37□□□□□ -0.59
SMAD1-215ENST00000515385 OR5H8P0DN80 308 aa11.37□□□□□ -0.59
SMAD1-215ENST00000515385 VSIG8P0DPA2 414 aa11.37□□□□□ -0.59
SMAD1-215ENST00000515385 PEBP1P30086 187 aaKnown RBP11.37□□□□□ -0.59
SMAD1-215ENST00000515385 PPM1AP35813 382 aa11.37□□□□□ -0.59
SMAD1-215ENST00000515385 RND2P52198 227 aa11.37□□□□□ -0.59
SMAD1-215ENST00000515385 LCN6P62502 163 aa11.37□□□□□ -0.59
SMAD1-215ENST00000515385 ID2Q02363 134 aa11.37□□□□□ -0.59
SMAD1-215ENST00000515385 DEFB134Q4QY38 66 aa11.37□□□□□ -0.59
SMAD1-215ENST00000515385 ZNF343Q6P1L6 599 aa11.37□□□□□ -0.59
SMAD1-215ENST00000515385 LANCL3Q6ZV70 420 aa11.37□□□□□ -0.59
SMAD1-215ENST00000515385 ARHGEF39Q8N4T4 335 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms