RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 RHBDD3Q9Y3P4 386 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 ADGRA3Q8IWK6 1321 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 A0A1B0GTQ1 180 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 RNASE2P10153 161 aaKnown RBP2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 UBE2E1P51965 193 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 AP1S2P56377 157 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 OR2B8PP59922 312 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 RAB11AP62491 216 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 ELF3P78545 371 aaPredicted RBP2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 OR1Q1Q15612 314 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 RAB11BQ15907 218 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 HIKESHIQ53FT3 197 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 KPRPQ5T749 579 aaPredicted RBP2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 TMEM236Q5W0B7 351 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 OR2T5Q6IEZ7 315 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 TRAM1L1Q8N609 369 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 OR2T29Q8NH02 315 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 ASZ1Q8WWH4 475 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 CDS1Q92903 461 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 WDR34Q96EX3 536 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 UBE2E2Q96LR5 201 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 IP6K3Q96PC2 410 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 LRRC42Q9Y546 428 aa2.63□□□□□ -1.99
HMGCS1-207ENST00000514610 IGHV3OR16-8A0A075B7F1 116 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 SLC22A20A6NK97 555 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 H0YIV9 168 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 M0R1X1 148 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 CHMP2AO43633 222 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 FARS2O95363 451 aaKnown RBP2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 LHBP01229 141 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 OR1G1P47890 313 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 IFITM3Q01628 133 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 SPAG1Q07617 926 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 FUT5Q11128 374 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 TSC22D1Q15714 1073 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 C5orf64Q2M2E5 130 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 C6orf99Q4VX62 202 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 OTUD6AQ7L8S5 288 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 ERO1BQ86YB8 467 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 NAT6Q93015 286 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 ISOC2Q96AB3 205 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 CSPG4P5Q96PW8 444 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 DHX35Q9H5Z1 703 aaKnown RBP2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 REEP1Q9H902 201 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 ZC4H2Q9NQZ6 224 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 DDX19BQ9UMR2 479 aa2.62□□□□□ -1.99
HMGCS1-207ENST00000514610 CCL15-CCL14A0A0B4J2E2 113 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 GOLGA6L7A0A1B0GV03 622 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 ZNF233A6NK53 670 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 C16orf90A8MZG2 172 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 CASC3O15234 703 aaKnown RBP2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 NTF3P20783 257 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 CCL15Q16663 113 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 ANGPTL8Q6UXH0 198 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 TMPRSS11AQ6ZMR5 421 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 STK40Q8N2I9 435 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 PROKR2Q8NFJ6 384 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 ENKURQ8TC29 256 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 DCAKDQ8WVC6 231 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 MARVELD1Q9BSK0 173 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 TREX1Q9NSU2 369 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 PSME2Q9UL46 239 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 SIGLEC7Q9Y286 467 aa2.61□□□□□ -1.99
HMGCS1-207ENST00000514610 A0A0B4J2E0 115 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 ZNF98A6NK75 572 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 GATBO75879 557 aaKnown RBP2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 RPN2P04844 631 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 CD28P10747 220 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 HSPD1P10809 573 aaKnown RBP2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 RALBP11234 206 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 PRKACBP22694 351 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 PSMB5P28074 263 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 APLNRP35414 380 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 NAB1Q13506 487 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 IGFBP7Q16270 282 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 LUZP6Q538Z0 58 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 DEGS2Q6QHC5 323 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 APCDD1LQ8NCL9 501 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 KLF14Q8TD94 323 aaPredicted RBP2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 RXFP2Q8WXD0 754 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 ISG20Q96AZ6 181 aaKnown RBP2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 S100PBPQ96BU1 408 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 LINC00574Q9H8X3 128 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 DHCR7Q9UBM7 475 aaKnown RBP2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 OR51B2Q9Y5P1 312 aa2.6□□□□□ -1.99
HMGCS1-207ENST00000514610 ARPC4-TTLL3A0A0A6YYG9 625 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 LINC01619G3V211 115 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 H3BN98 237 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 MANBAO00462 879 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 GFAPP14136 432 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 CXCR1P25024 350 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 GABRR2P28476 465 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 PCK1P35558 622 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 GDI2P50395 445 aaKnown RBP2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 DAOAP59103 153 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 KLHL12Q53G59 568 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 STEAP4Q687X5 459 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 Q6ZSR6 202 aa2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 MRPL21Q7Z2W9 205 aaKnown RBP2.59□□□□□ -1.99
HMGCS1-207ENST00000514610 SLC30A8Q8IWU4 369 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms