RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 TMEM236Q5W0B7 351 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 CD276Q5ZPR3 534 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 FAHD1Q6P587 224 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 WDR82Q6UXN9 313 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 THEM6Q8WUY1 208 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 UTP4Q969X6 686 aaKnown RBP8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 ITPKCQ96DU7 683 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 NRBF2Q96F24 287 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 LYZL4Q96KX0 146 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 PAPOLGQ9BWT3 736 aaKnown RBP8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 CADM1Q9BY67 442 aaKnown RBP8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 PPP1R3EQ9H7J1 279 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 NIPAL2Q9H841 368 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 RNPEPL1Q9HAU8 725 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 BRD7Q9NPI1 651 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 PAPOLBQ9NRJ5 636 aaKnown RBP8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 KIF17Q9P2E2 1029 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 KAAG1Q9UBP8 84 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 ZNF391Q9UJN7 358 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 RHBDD3Q9Y3P4 386 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 LRP12Q9Y561 859 aa8.68□□□□□ -1.02
HMGXB3-205ENST00000514469 SRRM5B3KS81 715 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 ZNF879B4DU55 563 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 GSC2O15499 205 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 MMP9P14780 707 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 MUC1P15941 1255 aaPredicted RBP8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 ALOX5APP20292 161 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 CFHR2P36980 270 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 GNALP38405 381 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 MTNR1AP48039 350 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 DAPP51397 102 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 CRISP1P54107 249 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 RPS7P62081 194 aaKnown RBP8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 IL5RAQ01344 420 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 APOFQ13790 326 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 SLC9A3R2Q15599 337 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 C11orf91Q3C1V1 193 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 GALNT4Q8N4A0 578 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 FTMTQ8N4E7 242 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 C3orf56Q8N813 242 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 OR8B12Q8NGG6 310 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 LRRC29Q8WV35 223 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 DUX5Q96PT3 197 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 TEX12Q9BXU0 123 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 YIPF3Q9GZM5 350 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 FGF23Q9GZV9 251 aaPredicted RBP8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 PRDM13Q9H4Q3 707 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 ABCB9Q9NP78 766 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 FAM206AQ9NX38 181 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 LAMP5Q9UJQ1 280 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 MPC1Q9Y5U8 109 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 SOX21Q9Y651 276 aaPredicted RBP8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 MEGF8Q7Z7M0 2845 aa8.67□□□□□ -1.02
HMGXB3-205ENST00000514469 ARHGAP32A7KAX9 2087 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 IGHV3OR15-7A0A075B7D8 119 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 MDFIC2A0A1B0GVS7 189 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 TMEM210A6NLX4 147 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 ANXA2P2A6NMY6 339 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 PRR32B1ATL7 298 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 P2RY10O00398 339 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 DVL1O14640 695 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 TMPRSS2O15393 492 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 CST4P01036 141 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 LIPFP07098 398 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 SFTPBP07988 381 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 MRPL3P09001 348 aaKnown RBP8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 BPIFB3P59826 476 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 ESRRGP62508 458 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 FOXL1Q12952 345 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 BNIP1Q12981 228 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 PRDX4Q13162 271 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 ATP6AP1Q15904 470 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 SNAPC1Q16533 368 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 MICBQ29980 383 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 WDR38Q5JTN6 314 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 GPR157Q5UAW9 335 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 LCN1P1Q5VSP4 162 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 DEGS2Q6QHC5 323 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 BRD3OSQ6XYD6 125 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 KRT74Q7RTS7 529 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 PNLDC1Q8NA58 520 aaKnown RBP8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 OR5K1Q8NHB7 308 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 HPSE2Q8WWQ2 592 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 OR5P3Q8WZ94 311 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 SLC25A28Q96A46 364 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 C12orf43Q96C57 262 aaKnown RBP8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 TBX15Q96SF7 602 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 TEAD3Q99594 435 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 MICU1Q9BPX6 476 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 RTL8AQ9BWD3 113 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 SIRPDQ9H106 197 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 TVP23BQ9NYZ1 205 aa8.66□□□□□ -1.02
HMGXB3-205ENST00000514469 A0A0U1RQV5 110 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 A0A1B0GW55 424 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 ACOD1A6NK06 481 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 ZNF850A8MQ14 1090 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 CDIPTO14735 213 aa8.65□□□□□ -1.02
HMGXB3-205ENST00000514469 PRKYO43930 277 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms