RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 PLPP7Q8NBV4 271 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 OR5K1Q8NHB7 308 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 VPS33AQ96AX1 596 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 MED30Q96HR3 178 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 RBM14Q96PK6 669 aaKnown RBP2.51□□□□□ -2.01
CHD1-211ENST00000514344 NAPGQ99747 312 aaPredicted RBP2.51□□□□□ -2.01
CHD1-211ENST00000514344 TMEM43Q9BTV4 400 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 EVA1AQ9H8M9 152 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 NDE1Q9NXR1 346 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 NINJ2Q9NZG7 142 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 CALML5Q9NZT1 146 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.51□□□□□ -2.01
CHD1-211ENST00000514344 POLR1DQ9Y2S0 133 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 SAR1BQ9Y6B6 198 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 SIRT4Q9Y6E7 314 aaPredicted RBP2.51□□□□□ -2.01
CHD1-211ENST00000514344 TMEM247A6NEH6 219 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 CPSF4LA6NMK7 179 aaKnown RBP2.51□□□□□ -2.01
CHD1-211ENST00000514344 OR2AT4A6NND4 320 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 ODF3BA8MYP8 253 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 J3QW42 95 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 SIGLEC5O15389 551 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 OR2F2O95006 317 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 TFAP2AP05549 437 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 FUT1P19526 365 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 ANOS1P23352 680 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 CDX1P47902 265 aaPredicted RBP2.51□□□□□ -2.01
CHD1-211ENST00000514344 SERPINB9P50453 376 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 DSTNP60981 165 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 MALLQ13021 153 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 AQP6Q13520 282 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 CCDC92Q53HC0 331 aaPredicted RBP2.51□□□□□ -2.01
CHD1-211ENST00000514344 ANXA8L1Q5VT79 327 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 ZYG11AQ6WRX3 759 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 C16orf82Q7Z2V1 217 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 DPY19L4Q7Z388 723 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 HDDC2Q7Z4H3 204 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 C17orf53Q8N3J3 647 aaPredicted RBP2.51□□□□□ -2.01
CHD1-211ENST00000514344 STPG2Q8N412 459 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 DRAM1Q8N682 238 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 ZNF645Q8N7E2 425 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 OR13D1Q8NGV5 346 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 ANGPTL6Q8NI99 470 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 DLX4Q92988 240 aaPredicted RBP2.51□□□□□ -2.01
CHD1-211ENST00000514344 ITFG2Q969R8 447 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 C12orf43Q96C57 262 aaKnown RBP2.51□□□□□ -2.01
CHD1-211ENST00000514344 RNF183Q96D59 192 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 RNPEPL1Q9HAU8 725 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 USE1Q9NZ43 259 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 ZNF229Q9UJW7 825 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 EMCNQ9ULC0 261 aa2.51□□□□□ -2.01
CHD1-211ENST00000514344 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.5□□□□□ -2.01
CHD1-211ENST00000514344 A0A0G2JPF8 293 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 A0A0J9YWU9 116 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 A0A1W2PPH5 198 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 FAM172BPA6NC97 362 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 MAGEA13PA6NCF6 341 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 A8MZ25 164 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 HNRNPCL2B2RXH8 293 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 HNRNPCL3B7ZW38 293 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 M0R3H8 397 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 CCRL2O00421 344 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 HNRNPCL1O60812 293 aaKnown RBP2.5□□□□□ -2.01
CHD1-211ENST00000514344 ACAA1P09110 424 aaPredicted RBP2.5□□□□□ -2.01
CHD1-211ENST00000514344 OR8U8P0C7N1 319 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 HNRNPCL4P0DMR1 293 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 IGHV1-8P0DP01 117 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 NR2C1P13056 603 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 TCP1P17987 556 aaKnown RBP2.5□□□□□ -2.01
CHD1-211ENST00000514344 FASP25445 335 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 GRK5P34947 590 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 SLURP1P55000 103 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 ACTA2P62736 377 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 ACTG2P63267 376 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 ACTC1P68032 377 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 ACTA1P68133 377 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 ZNF92Q03936 586 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 ZNF616Q08AN1 781 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 HNF4GQ14541 408 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 MEP1BQ16820 701 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 GTDC1Q4AE62 458 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 ATPAF1Q5TC12 328 aaPredicted RBP2.5□□□□□ -2.01
CHD1-211ENST00000514344 TTC33Q6PID6 262 aaPredicted RBP2.5□□□□□ -2.01
CHD1-211ENST00000514344 SLC2A7Q6PXP3 512 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 CFAP77Q6ZQR2 320 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 SLC35E3Q7Z769 313 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 OR56B2PQ8NGI1 322 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 OR1N2Q8NGR9 330 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 OR2T27Q8NH04 317 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 C4orf3Q8WVX3 66 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 SLC22A4Q9H015 551 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 NSRP1Q9H0G5 558 aaKnown RBP2.5□□□□□ -2.01
CHD1-211ENST00000514344 GHITMQ9H3K2 345 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 YY1AP1Q9H869 796 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 SP140LQ9H930 580 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 PLEKHA3Q9HB20 300 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 TBC1D23Q9NUY8 699 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 C14orf119Q9NWQ9 140 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 FAM53CQ9NYF3 392 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 ACTR3BQ9P1U1 418 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 PRDM4Q9UKN5 801 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms