RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TNFRSF13CQ96RJ3 184 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 NAA11Q9BSU3 229 aaPredicted RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 CNTD2Q9H8S5 307 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 PARP11Q9NR21 331 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 COPS7AQ9UBW8 275 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 SLC5A6Q9Y289 635 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 RAXQ9Y2V3 346 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 MRPS18BQ9Y676 258 aaKnown RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 A0A0A6YYD4 124 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 NSG1A0A0A6YYJ2 146 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 SMAD9O15198 467 aaKnown RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 DUS4LO95620 317 aaKnown RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 CSTAP01040 98 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 CT62P0C5K7 136 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 ITPKBP27987 946 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 IL24Q13007 206 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 RUNX2Q13950 521 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 MESTQ5EB52 335 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 ACER2Q5QJU3 275 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 IGFL2Q6UWQ7 119 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 HEPN1Q6WQI6 88 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 C5orf24Q7Z6I8 188 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 HMGN2P46Q86SG4 172 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 VSTM2LQ96N03 204 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 AMELYQ99218 206 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 RTBDNQ9BSG5 229 aaPredicted RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 VN1R1Q9GZP7 353 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 CHST5Q9GZS9 411 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 ARL6Q9H0F7 186 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 TRAV27A0A087WT01 109 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 IGLV1-36A0A0B4J1U3 117 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 MSGN1A6NI15 193 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 FBXO24O75426 580 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 IL18BPO95998 194 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 UMODP07911 640 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 TACR3P29371 465 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 PYCR1P32322 319 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 ALDH3B1P43353 468 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 CLDN6P56747 220 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 GMFBP60983 142 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 MFGE8Q08431 387 aaPredicted RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 EIF2S3LQ2VIR3 472 aaKnown RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 MOGAT2Q3SYC2 334 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 DCST2Q5T1A1 773 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 C1orf189Q5VU69 101 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 AADACL3Q5VUY0 350 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 NPSR1Q6W5P4 371 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 SLC38A9Q8NBW4 561 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 OR2G2Q8NGZ5 317 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 RIMS4Q9H426 269 aaPredicted RBP6.53□□□□□ -1.36
CLIP1-205ENST00000514271 ZDHHC8Q9ULC8 765 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 HSF4Q9ULV5 492 aa6.53□□□□□ -1.36
CLIP1-205ENST00000514271 PCSK5Q92824 1860 aa6.52□□□□□ -1.36
CLIP1-205ENST00000514271 OR2AT4A6NND4 320 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 J3QLW9 94 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 HCRTR1O43613 425 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 KDM4BO94953 1096 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 GAPDHP04406 335 aaKnown RBP6.52□□□□□ -1.37
CLIP1-205ENST00000514271 COX6A1P12074 109 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF19P17023 458 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 SPINK2P20155 84 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 ABCD3P28288 659 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 LPAR6P43657 344 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 PMS2P11Q13670 270 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.52□□□□□ -1.37
CLIP1-205ENST00000514271 VAX1Q5SQQ9 334 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 TMEM69Q5SWH9 247 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 HES5Q5TA89 166 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 DHRS11Q6UWP2 260 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 TMPPEQ6ZT21 453 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 AKR7LQ8NHP1 331 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 PHOSPHO1Q8TCT1 267 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 WNT2BQ93097 391 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 S100A16Q96FQ6 103 aaKnown RBP6.52□□□□□ -1.37
CLIP1-205ENST00000514271 IMMP1LQ96LU5 166 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 TINAGL1Q9GZM7 467 aaPredicted RBP6.52□□□□□ -1.37
CLIP1-205ENST00000514271 LAT2Q9GZY6 243 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 MRPL22Q9NWU5 206 aaKnown RBP6.52□□□□□ -1.37
CLIP1-205ENST00000514271 P4HTMQ9NXG6 502 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 GDF2Q9UK05 429 aaPredicted RBP6.52□□□□□ -1.37
CLIP1-205ENST00000514271 AMDHD2Q9Y303 409 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 HS3ST3B1Q9Y662 390 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 VCANP13611 3396 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 LOC100289279A0A1B0GTE1 492 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 A0A1B0GWA3 101 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 ZNF432O94892 652 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 WISP1O95388 367 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 PNPP00491 289 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 HOXB5P09067 269 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 HOXA5P20719 270 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 NFYBP25208 207 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 CERS1P27544 350 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 OR1D4P47884 311 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 P2RY4P51582 365 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 MFAP5Q13361 173 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 PCOLCEQ15113 449 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 RNPS1Q15287 305 aaKnown RBP6.52□□□□□ -1.37
CLIP1-205ENST00000514271 DCAF10Q5QP82 559 aa6.52□□□□□ -1.37
CLIP1-205ENST00000514271 AVPI1Q5T686 147 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms