RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 CREBBPQ92793 2442 aa12.32□□□□□ -0.44
SNF8-212ENST00000514089 HEATR1Q9H583 2144 aaKnown RBP12.32□□□□□ -0.44
SNF8-212ENST00000514089 DSCAMO60469 2012 aa12.32□□□□□ -0.44
SNF8-212ENST00000514089 ZNF816-ZNF321PA0A0X1KG74 233 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 MLNRO43193 412 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 DHRS3O75911 302 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 SERPINA3P01011 423 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 OCM2P0CE71 109 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 OCMP0CE72 109 aaPredicted RBP12.31□□□□□ -0.44
SNF8-212ENST00000514089 UBCP0CG48 685 aaKnown RBP12.31□□□□□ -0.44
SNF8-212ENST00000514089 ZNF12P17014 697 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 GIFP27352 417 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 CHN2P52757 468 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 PRDX4Q13162 271 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 OR8B8Q15620 311 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 WDR38Q5JTN6 314 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 AVPI1Q5T686 147 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 TMEM244Q5VVB8 128 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 MOB3CQ70IA8 216 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 ZDHHC23Q8IYP9 409 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 C1orf87Q8N0U7 546 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 CELF2-AS1Q8N7Q2 184 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 OR2G2Q8NGZ5 317 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 HAVCR2Q8TDQ0 301 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 DVL3Q92997 716 aaPredicted RBP12.31□□□□□ -0.44
SNF8-212ENST00000514089 RNF170Q96K19 258 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 RTL8AQ9BWD3 113 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 COMMD4Q9H0A8 199 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 ISG20L2Q9H9L3 353 aaKnown RBP12.31□□□□□ -0.44
SNF8-212ENST00000514089 TMEM106BQ9NUM4 274 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 CNOT2Q9NZN8 540 aaKnown RBP12.31□□□□□ -0.44
SNF8-212ENST00000514089 RAB26Q9ULW5 256 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 CAB39Q9Y376 341 aaPredicted RBP12.31□□□□□ -0.44
SNF8-212ENST00000514089 TPRKBQ9Y3C4 175 aa12.31□□□□□ -0.44
SNF8-212ENST00000514089 ANKRD17O75179 2603 aaKnown RBP12.31□□□□□ -0.44
SNF8-212ENST00000514089 TRBV2A0A0J9YWF9 115 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 hCG_1807616A0A1W2PRN6 198 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 MYL12BO14950 172 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 SRSF10O75494 262 aaKnown RBP12.3□□□□□ -0.44
SNF8-212ENST00000514089 CST4P01036 141 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 RPSAP08865 295 aaKnown RBP12.3□□□□□ -0.44
SNF8-212ENST00000514089 CCDC159P0C7I6 412 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 MYF6P23409 242 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 CD200P41217 278 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 ETV1P50549 477 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 CDH15P55291 814 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 RIN1Q13671 783 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 ALKBH1Q13686 389 aaKnown RBP12.3□□□□□ -0.44
SNF8-212ENST00000514089 RDH10Q8IZV5 341 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 PRSS35Q8N3Z0 413 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 BOLLQ8N9W6 283 aaKnown RBP12.3□□□□□ -0.44
SNF8-212ENST00000514089 CCDC54Q8NEL0 328 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 ZNF420Q8TAQ5 688 aaPredicted RBP12.3□□□□□ -0.44
SNF8-212ENST00000514089 GATAD2BQ8WXI9 593 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 ERGIC1Q969X5 290 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 ZNF184Q99676 751 aaPredicted RBP12.3□□□□□ -0.44
SNF8-212ENST00000514089 SOX7Q9BT81 388 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 ANKRD60Q9BZ19 345 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 GCM1Q9NP62 436 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 PLCXD1Q9NUJ7 323 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 FRRS1LQ9P0K9 344 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 PSORS1C1Q9UIG5 152 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 PCDHB10Q9UN67 800 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 ERGIC3Q9Y282 383 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 USF3Q68DE3 2245 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 CCDC168Q8NDH2 2452 aa12.3□□□□□ -0.44
SNF8-212ENST00000514089 PRRC2AP48634 2157 aaKnown RBP12.29□□□□□ -0.44
SNF8-212ENST00000514089 A6NIN4 97 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 RP2O75695 350 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 NRASP01111 189 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 PIPP12273 146 aaPredicted RBP12.29□□□□□ -0.44
SNF8-212ENST00000514089 FAHP16930 419 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 ZNF20P17024 532 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 EEF1B2P24534 225 aaKnown RBP12.29□□□□□ -0.44
SNF8-212ENST00000514089 ACKR3P25106 362 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 CCR9P51686 369 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 LOXL1Q08397 574 aaPredicted RBP12.29□□□□□ -0.44
SNF8-212ENST00000514089 MAB21L1Q13394 359 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 SPRNQ5BIV9 151 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 CEP78Q5JTW2 689 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 ZBTB37Q5TC79 503 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 PRAMEF6Q5VXH4 476 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 PLCXD3Q63HM9 321 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 CLEC9AQ6UXN8 241 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 BIVMQ86UB2 503 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 PLPP7Q8NBV4 271 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 PELI1Q96FA3 418 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 COX4I2Q96KJ9 171 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 GAL3ST1Q99999 423 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 JAM3Q9BX67 310 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 CCDC90BQ9GZT6 254 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 C1orf123Q9NWV4 160 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 BABAM2Q9NXR7 383 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 UBAP1Q9NZ09 502 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 SLC7A11Q9UPY5 501 aa12.29□□□□□ -0.44
SNF8-212ENST00000514089 RAI1Q7Z5J4 1906 aaPredicted RBP12.29□□□□□ -0.44
SNF8-212ENST00000514089 IGHV4-61A0A0C4DH41 118 aa12.28□□□□□ -0.44
SNF8-212ENST00000514089 LRP5LA4QPB2 252 aa12.28□□□□□ -0.44
SNF8-212ENST00000514089 VWC2LB2RUY7 222 aa12.28□□□□□ -0.44
SNF8-212ENST00000514089 CYB5R3P00387 301 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms