RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 MTFR2Q6P444 385 aa11.12□□□□□ -0.63
PVT1-203ENST00000513868 MYPOPQ86VE0 399 aaPredicted RBP11.12□□□□□ -0.63
PVT1-203ENST00000513868 ANGPTL5Q86XS5 388 aa11.12□□□□□ -0.63
PVT1-203ENST00000513868 ZNF610Q8N9Z0 462 aa11.12□□□□□ -0.63
PVT1-203ENST00000513868 AKAP1Q92667 903 aaKnown RBP eCLIP11.12□□□□□ -0.63
PVT1-203ENST00000513868 FBLN5Q9UBX5 448 aa11.12□□□□□ -0.63
PVT1-203ENST00000513868 FIGNL2A6NMB9 653 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 GABARAPH6UMI1 98 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 LYRM1O43325 122 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 NGFP01138 241 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 CRHP06850 196 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 HCKP08631 526 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 VSIG8P0DPA2 414 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 RAB6AP20340 208 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 TIMP3P35625 211 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 WNT5AP41221 380 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 KIR2DL3P43628 341 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 OR3A4PP47883 348 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 SRP9P49458 86 aaKnown RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 BCAP31P51572 246 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 CAPZA1P52907 286 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 KISS1Q15726 138 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 RNASE12Q5GAN4 147 aaKnown RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 HACD4Q5VWC8 232 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 OR52I2Q8NH67 350 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 NANOS1Q8WY41 292 aaKnown RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 APOBEC3DQ96AK3 386 aaPredicted RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 SLX1AQ9BQ83 275 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 SLC22A4Q9H015 551 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 ATG5Q9H1Y0 275 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 OPN3Q9H1Y3 402 aaPredicted RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 STARD10Q9Y365 291 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 RBMX2Q9Y388 322 aaKnown RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 A0A1W2PR80 420 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 MEIOCA2RUB1 952 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 WIPF3A6NGB9 483 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 TMEM14DPA8MWL7 114 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 C1QTNF9BB2RNN3 333 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 ORC5O43913 435 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 GMDSO60547 372 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 SLC34A2O95436 690 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 C1QTNF9P0C862 333 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 CEACAM8P31997 349 aaPredicted RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 ID4P47928 161 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 PER3P56645 1201 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 GK2Q14410 553 aaPredicted RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 MOGAT2Q3SYC2 334 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 ZNF57Q68EA5 555 aaPredicted RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 C3P1Q6ZMU1 363 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 C1QL2Q7Z5L3 287 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 CCDC36Q8IYA8 594 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 ZNF101Q8IZC7 436 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 CELF2-AS1Q8N7Q2 184 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 WDR31Q8NA23 367 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 C1orf162Q8NEQ5 155 aaPredicted RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 UBASH3BQ8TF42 649 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 NPRL2Q8WTW4 380 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 SNRNP40Q96DI7 357 aaKnown RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 ZC3HAV1LQ96H79 300 aaKnown RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 POFUT1Q9H488 388 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 DIABLOQ9NR28 239 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 GPR173Q9NS66 373 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 RBFOX1Q9NWB1 397 aaKnown RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 RAB22AQ9UL26 194 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 PROCRQ9UNN8 238 aa11.11□□□□□ -0.63
PVT1-203ENST00000513868 MRPS28Q9Y2Q9 187 aaKnown RBP11.11□□□□□ -0.63
PVT1-203ENST00000513868 CELA3BP08861 270 aa11.1□□□□□ -0.63
PVT1-203ENST00000513868 NAT2P11245 290 aa11.1□□□□□ -0.63
PVT1-203ENST00000513868 HOXB1P14653 301 aaPredicted RBP11.1□□□□□ -0.63
PVT1-203ENST00000513868 ALDH3B1P43353 468 aa11.1□□□□□ -0.63
PVT1-203ENST00000513868 MRPS10P82664 201 aaKnown RBP11.1□□□□□ -0.63
PVT1-203ENST00000513868 PMPCAQ10713 525 aa11.1□□□□□ -0.63
PVT1-203ENST00000513868 KLF9Q13886 244 aaPredicted RBP11.1□□□□□ -0.63
PVT1-203ENST00000513868 GPR176Q14439 515 aa11.1□□□□□ -0.63
PVT1-203ENST00000513868 PRR30Q53SZ7 412 aaPredicted RBP11.1□□□□□ -0.63
PVT1-203ENST00000513868 CLVS2Q5SYC1 327 aa11.1□□□□□ -0.63
PVT1-203ENST00000513868 AWAT2Q6E213 333 aa11.1□□□□□ -0.63
PVT1-203ENST00000513868 GLIPR1L1Q6UWM5 242 aa11.1□□□□□ -0.63
PVT1-203ENST00000513868 CXorf67Q86X51 503 aaPredicted RBP11.1□□□□□ -0.63
PVT1-203ENST00000513868 CADM3Q8N126 398 aa11.1□□□□□ -0.63
PVT1-203ENST00000513868 SLC30A7Q8NEW0 376 aa11.1□□□□□ -0.63
PVT1-203ENST00000513868 PIGTQ969N2 578 aa11.1□□□□□ -0.63
PVT1-203ENST00000513868 ITPKCQ96DU7 683 aa11.1□□□□□ -0.63
PVT1-203ENST00000513868 KLK11Q9UBX7 282 aa11.1□□□□□ -0.63
PVT1-203ENST00000513868 TUBD1Q9UJT1 453 aa11.1□□□□□ -0.63
PVT1-203ENST00000513868 PCNX1Q96RV3 2341 aa11.09□□□□□ -0.63
PVT1-203ENST00000513868 IGKV1-27A0A075B6S5 117 aa11.09□□□□□ -0.63
PVT1-203ENST00000513868 TRAV18A0A075B6X5 111 aa11.09□□□□□ -0.63
PVT1-203ENST00000513868 RAB27BO00194 218 aa11.09□□□□□ -0.63
PVT1-203ENST00000513868 IL2RAP01589 272 aa11.09□□□□□ -0.63
PVT1-203ENST00000513868 HOXD4P09016 255 aaPredicted RBP11.09□□□□□ -0.63
PVT1-203ENST00000513868 GLI4P10075 376 aa11.09□□□□□ -0.63
PVT1-203ENST00000513868 BTCP35070 178 aa11.09□□□□□ -0.63
PVT1-203ENST00000513868 APLNRP35414 380 aa11.09□□□□□ -0.63
PVT1-203ENST00000513868 GDNFP39905 211 aa11.09□□□□□ -0.63
PVT1-203ENST00000513868 PTGFRP43088 359 aa11.09□□□□□ -0.63
PVT1-203ENST00000513868 INPP1P49441 399 aa11.09□□□□□ -0.63
PVT1-203ENST00000513868 UBE2NP61088 152 aaKnown RBP11.09□□□□□ -0.63
PVT1-203ENST00000513868 HLXQ14774 488 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms