RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 TMEM42Q69YG0 159 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 ELMOD2Q8IZ81 293 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 MUC20Q8N307 709 aaPredicted RBP8.12□□□□□ -1.11
RNF4-221ENST00000513643 GCSAMQ8N6F7 178 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 OR1M1Q8NGA1 313 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 OR5P3Q8WZ94 311 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 GAL3ST1Q99999 423 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 APOL4Q9BPW4 351 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 TMEM246Q9BRR3 403 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 ZNF649Q9BS31 505 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 ADAT1Q9BUB4 502 aaKnown RBP8.12□□□□□ -1.11
RNF4-221ENST00000513643 PBOV1Q9GZY1 135 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 RNPEPL1Q9HAU8 725 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 MRPS18AQ9NVS2 196 aaKnown RBP8.12□□□□□ -1.11
RNF4-221ENST00000513643 RNF7Q9UBF6 113 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 EXOGQ9Y2C4 368 aaKnown RBP8.12□□□□□ -1.11
RNF4-221ENST00000513643 PPIAL4AQ9Y536 164 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 N6AMT1Q9Y5N5 214 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 MPC1Q9Y5U8 109 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 R4GMQ9 66 aa8.12□□□□□ -1.11
RNF4-221ENST00000513643 LRRC30A6NM36 301 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 ANKRD30BLA7E2S9 258 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 ZNF670-ZNF695F2Z2N8 137 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.11□□□□□ -1.11
RNF4-221ENST00000513643 FOXH1O75593 365 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 FCN3O75636 299 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 RIDAP52758 137 aaKnown RBP8.11□□□□□ -1.11
RNF4-221ENST00000513643 ZNF85Q03923 595 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 MZT1Q08AG7 82 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 ZNF154Q13106 437 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 SNCBQ16143 134 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 ZIK1Q3SY52 487 aaPredicted RBP8.11□□□□□ -1.11
RNF4-221ENST00000513643 ZBTB37Q5TC79 503 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 MEDAGQ5VYS4 303 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 ZBTB49Q6ZSB9 765 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 IL17RELQ6ZVW7 336 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 EGFL6Q8IUX8 553 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 ENTHD1Q8IYW4 607 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 C1orf87Q8N0U7 546 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 KLHL36Q8N4N3 616 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 DEFB108BQ8NET1 73 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 OR51G2Q8NGK0 314 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 FAM81AQ8TBF8 368 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 HPSE2Q8WWQ2 592 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 DVL3Q92997 716 aaPredicted RBP8.11□□□□□ -1.11
RNF4-221ENST00000513643 RFKQ969G6 155 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 RDH12Q96NR8 316 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 MDFIQ99750 246 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 MOB1AQ9H8S9 216 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 FN3KRPQ9HA64 309 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 LPAR2Q9HBW0 351 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 BRD7Q9NPI1 651 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 MMP26Q9NRE1 261 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 C14orf119Q9NWQ9 140 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 FAM118AQ9NWS6 357 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 KAAG1Q9UBP8 84 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 MIOXQ9UGB7 285 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.11□□□□□ -1.11
RNF4-221ENST00000513643 LRCH1Q9Y2L9 728 aa8.11□□□□□ -1.11
RNF4-221ENST00000513643 A0A0G2JMP0 313 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.1□□□□□ -1.11
RNF4-221ENST00000513643 A0A0X1KG70 313 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 LOC100130705A0A1B0GUX0 176 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 ISPDA4D126 451 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 METTL15A6NJ78 407 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 DHRS7CA6NNS2 312 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 LGALS8O00214 317 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 ZNF205O95201 554 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 IFNA2P01563 188 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 ZNF12P17014 697 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 SRD5A1P18405 259 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 MTNR1AP48039 350 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 IL5RAQ01344 420 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 PAX8Q06710 450 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 PRDX4Q13162 271 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 ZNF829Q3KNS6 432 aaPredicted RBP8.1□□□□□ -1.11
RNF4-221ENST00000513643 CDONQ4KMG0 1287 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 LIPNQ5VXI9 398 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 FDX2Q6P4F2 183 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 LYPD2Q6UXB3 125 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 WDR82Q6UXN9 313 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 DCDC5Q6ZRR9 648 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 ZNF826PQ6ZT77 177 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 CATSPERDQ86XM0 798 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 OR4M2Q8NGB6 313 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 OR11L1Q8NGX0 322 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 OR14K1Q8NGZ2 314 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 OR51E1Q8TCB6 317 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 RORBQ92753 470 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 ABCB9Q9NP78 766 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 GPR84Q9NQS5 396 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 UFSP2Q9NUQ7 469 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 C1orf123Q9NWV4 160 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 INSIG2Q9Y5U4 225 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 SNX5Q9Y5X3 404 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 V9GYS6 101 aa8.1□□□□□ -1.11
RNF4-221ENST00000513643 DOCK11Q5JSL3 2073 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 ZNF816-ZNF321PA0A0X1KG74 233 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 TMEM210A6NLX4 147 aa8.09□□□□□ -1.11
RNF4-221ENST00000513643 ZNF850A8MQ14 1090 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms