RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 ZNF391Q9UJN7 358 aa8.83□□□□□ -1
DDX41-216ENST00000513562 TMEM5Q9Y2B1 443 aa8.83□□□□□ -1
DDX41-216ENST00000513562 SNX13Q9Y5W8 968 aa8.83□□□□□ -1
DDX41-216ENST00000513562 TRBV23-1A0A0A0MS06 115 aa8.82□□□□□ -1
DDX41-216ENST00000513562 A6NDX4 124 aa8.82□□□□□ -1
DDX41-216ENST00000513562 ANKRD30BLA7E2S9 258 aa8.82□□□□□ -1
DDX41-216ENST00000513562 SIGLEC5O15389 551 aa8.82□□□□□ -1
DDX41-216ENST00000513562 TFF1P04155 84 aa8.82□□□□□ -1
DDX41-216ENST00000513562 IFNW1P05000 195 aa8.82□□□□□ -1
DDX41-216ENST00000513562 NDUFB7P17568 137 aa8.82□□□□□ -1
DDX41-216ENST00000513562 KDELR2P33947 212 aa8.82□□□□□ -1
DDX41-216ENST00000513562 DDOSTP39656 456 aa8.82□□□□□ -1
DDX41-216ENST00000513562 RPS6KA3P51812 740 aa8.82□□□□□ -1
DDX41-216ENST00000513562 SELENOWP63302 87 aa8.82□□□□□ -1
DDX41-216ENST00000513562 SLC36A3Q495N2 470 aa8.82□□□□□ -1
DDX41-216ENST00000513562 TCTEX1D4Q5JR98 221 aa8.82□□□□□ -1
DDX41-216ENST00000513562 DPY19L2P2Q6ZN68 376 aa8.82□□□□□ -1
DDX41-216ENST00000513562 Q6ZS46 218 aa8.82□□□□□ -1
DDX41-216ENST00000513562 RNF144BQ7Z419 303 aa8.82□□□□□ -1
DDX41-216ENST00000513562 TMEM219Q86XT9 240 aa8.82□□□□□ -1
DDX41-216ENST00000513562 OR5AU1Q8NGC0 362 aa8.82□□□□□ -1
DDX41-216ENST00000513562 OR8J3Q8NGG0 315 aa8.82□□□□□ -1
DDX41-216ENST00000513562 ANGPTL6Q8NI99 470 aa8.82□□□□□ -1
DDX41-216ENST00000513562 SPSB4Q96A44 273 aa8.82□□□□□ -1
DDX41-216ENST00000513562 MED30Q96HR3 178 aa8.82□□□□□ -1
DDX41-216ENST00000513562 FAM46AQ96IP4 442 aaKnown RBP8.82□□□□□ -1
DDX41-216ENST00000513562 SH3GL1Q99961 368 aa8.82□□□□□ -1
DDX41-216ENST00000513562 GPR61Q9BZJ8 451 aa8.82□□□□□ -1
DDX41-216ENST00000513562 WDR13Q9H1Z4 485 aa8.82□□□□□ -1
DDX41-216ENST00000513562 MUC13Q9H3R2 512 aa8.82□□□□□ -1
DDX41-216ENST00000513562 SNTG1Q9NSN8 517 aa8.82□□□□□ -1
DDX41-216ENST00000513562 TENM2Q9NT68 2774 aa8.82□□□□□ -1
DDX41-216ENST00000513562 FAM90A8PA6NJQ4 464 aa8.81□□□□□ -1
DDX41-216ENST00000513562 FXYD1O00168 92 aa8.81□□□□□ -1
DDX41-216ENST00000513562 CDIPTO14735 213 aa8.81□□□□□ -1
DDX41-216ENST00000513562 ALDOBP05062 364 aa8.81□□□□□ -1
DDX41-216ENST00000513562 POU1F1P28069 291 aa8.81□□□□□ -1
DDX41-216ENST00000513562 VDAC2P45880 294 aaPredicted RBP8.81□□□□□ -1
DDX41-216ENST00000513562 CYLC2Q14093 348 aaPredicted RBP8.81□□□□□ -1
DDX41-216ENST00000513562 TMEM95Q3KNT9 176 aa8.81□□□□□ -1
DDX41-216ENST00000513562 KLHL22Q53GT1 634 aa8.81□□□□□ -1
DDX41-216ENST00000513562 VTCN1Q7Z7D3 282 aa8.81□□□□□ -1
DDX41-216ENST00000513562 ZBTB46Q86UZ6 589 aa8.81□□□□□ -1
DDX41-216ENST00000513562 MKXQ8IYA7 352 aa8.81□□□□□ -1
DDX41-216ENST00000513562 DYNAPQ8N1N2 210 aa8.81□□□□□ -1
DDX41-216ENST00000513562 CYB561A3Q8NBI2 242 aa8.81□□□□□ -1
DDX41-216ENST00000513562 OR10Z1Q8NGY1 313 aa8.81□□□□□ -1
DDX41-216ENST00000513562 DPF1Q92782 380 aa8.81□□□□□ -1
DDX41-216ENST00000513562 RSRC1Q96IZ7 334 aaKnown RBP8.81□□□□□ -1
DDX41-216ENST00000513562 ANKRD19PQ9H560 264 aa8.81□□□□□ -1
DDX41-216ENST00000513562 ELL3Q9HB65 397 aaPredicted RBP8.81□□□□□ -1
DDX41-216ENST00000513562 SRA1Q9HD15 236 aaKnown RBP8.81□□□□□ -1
DDX41-216ENST00000513562 MRPL22Q9NWU5 206 aaKnown RBP8.81□□□□□ -1
DDX41-216ENST00000513562 KCNG2Q9UJ96 466 aa8.81□□□□□ -1
DDX41-216ENST00000513562 PCDHGB5Q9Y5G0 923 aa8.81□□□□□ -1
DDX41-216ENST00000513562 TSSC4Q9Y5U2 329 aaPredicted RBP8.81□□□□□ -1
DDX41-216ENST00000513562 XRCC2O43543 280 aa8.8□□□□□ -1
DDX41-216ENST00000513562 SYNGR1O43759 233 aa8.8□□□□□ -1
DDX41-216ENST00000513562 CLIC3O95833 236 aa8.8□□□□□ -1
DDX41-216ENST00000513562 ACAA1P09110 424 aaPredicted RBP8.8□□□□□ -1
DDX41-216ENST00000513562 TROVE2P10155 538 aaKnown RBP eCLIP8.8□□□□□ -1
DDX41-216ENST00000513562 OMPP47874 163 aa8.8□□□□□ -1
DDX41-216ENST00000513562 RAB13P51153 203 aa8.8□□□□□ -1
DDX41-216ENST00000513562 LGALS4P56470 323 aa8.8□□□□□ -1
DDX41-216ENST00000513562 GMFBP60983 142 aa8.8□□□□□ -1
DDX41-216ENST00000513562 MAGOHP61326 146 aaKnown RBP8.8□□□□□ -1
DDX41-216ENST00000513562 BLCAPP62952 87 aa8.8□□□□□ -1
DDX41-216ENST00000513562 SPIBQ01892 262 aa8.8□□□□□ -1
DDX41-216ENST00000513562 PLA1AQ53H76 456 aa8.8□□□□□ -1
DDX41-216ENST00000513562 ARSJQ5FYB0 599 aaPredicted RBP8.8□□□□□ -1
DDX41-216ENST00000513562 CASC10Q5T4H9 136 aa8.8□□□□□ -1
DDX41-216ENST00000513562 CCDC121Q6ZUS5 278 aa8.8□□□□□ -1
DDX41-216ENST00000513562 RRM2BQ7LG56 351 aa8.8□□□□□ -1
DDX41-216ENST00000513562 LHFPL4Q7Z7J7 247 aa8.8□□□□□ -1
DDX41-216ENST00000513562 FAM185AQ8N0U4 392 aa8.8□□□□□ -1
DDX41-216ENST00000513562 C11orf42Q8N5U0 333 aa8.8□□□□□ -1
DDX41-216ENST00000513562 LINC00482Q8N8I6 264 aa8.8□□□□□ -1
DDX41-216ENST00000513562 OR5K1Q8NHB7 308 aa8.8□□□□□ -1
DDX41-216ENST00000513562 RPS4Y2Q8TD47 263 aa8.8□□□□□ -1
DDX41-216ENST00000513562 STON2Q8WXE9 905 aa8.8□□□□□ -1
DDX41-216ENST00000513562 NMNAT3Q96T66 252 aa8.8□□□□□ -1
DDX41-216ENST00000513562 HEXA-AS1Q9H8Q6 139 aa8.8□□□□□ -1
DDX41-216ENST00000513562 RPRD1BQ9NQG5 326 aaKnown RBP8.8□□□□□ -1
DDX41-216ENST00000513562 PITPNC1Q9UKF7 332 aa8.8□□□□□ -1
DDX41-216ENST00000513562 LRP12Q9Y561 859 aa8.8□□□□□ -1
DDX41-216ENST00000513562 STAB2Q8WWQ8 2551 aa8.8□□□□□ -1
DDX41-216ENST00000513562 TCRBV4S1A1TA0A5B7 111 aa8.79□□□□□ -1
DDX41-216ENST00000513562 FAM220BPB1ANY3 271 aa8.79□□□□□ -1
DDX41-216ENST00000513562 GLCEO94923 617 aa8.79□□□□□ -1
DDX41-216ENST00000513562 RENP00797 406 aa8.79□□□□□ -1
DDX41-216ENST00000513562 HLA-DQA2P01906 255 aa8.79□□□□□ -1
DDX41-216ENST00000513562 SLC2A1P11166 492 aa8.79□□□□□ -1
DDX41-216ENST00000513562 COX7A1P24310 79 aa8.79□□□□□ -1
DDX41-216ENST00000513562 NOS3P29474 1203 aa8.79□□□□□ -1
DDX41-216ENST00000513562 FAM3AP98173 230 aa8.79□□□□□ -1
DDX41-216ENST00000513562 DOC2BQ14184 412 aa8.79□□□□□ -1
DDX41-216ENST00000513562 NKAPLQ5M9Q1 402 aa8.79□□□□□ -1
DDX41-216ENST00000513562 SMARCD3Q6STE5 483 aa8.79□□□□□ -1
DDX41-216ENST00000513562 SLC16A9Q7RTY1 509 aa8.79□□□□□ -1
DDX41-216ENST00000513562 OR4C15Q8NGM1 316 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms