RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 COMMD4Q9H0A8 199 aa2.54□□□□□ -2
TOPBP1-208ENST00000511439 STMN4Q9H169 189 aaPredicted RBP2.54□□□□□ -2
TOPBP1-208ENST00000511439 PNO1Q9NRX1 252 aaKnown RBP2.54□□□□□ -2
TOPBP1-208ENST00000511439 C1orf123Q9NWV4 160 aa2.54□□□□□ -2
TOPBP1-208ENST00000511439 RDH8Q9NYR8 311 aa2.54□□□□□ -2
TOPBP1-208ENST00000511439 EHFQ9NZC4 300 aa2.54□□□□□ -2
TOPBP1-208ENST00000511439 DPM3Q9P2X0 92 aa2.54□□□□□ -2
TOPBP1-208ENST00000511439 B9D1Q9UPM9 204 aa2.54□□□□□ -2
TOPBP1-208ENST00000511439 TRAF3IP3Q9Y228 551 aa2.54□□□□□ -2
TOPBP1-208ENST00000511439 GMPPBQ9Y5P6 360 aa2.54□□□□□ -2
TOPBP1-208ENST00000511439 AP4B1Q9Y6B7 739 aa2.54□□□□□ -2
TOPBP1-208ENST00000511439 SCN3AQ9NY46 2000 aa2.54□□□□□ -2
TOPBP1-208ENST00000511439 SNRNP200O75643 2136 aaKnown RBP2.53□□□□□ -2
TOPBP1-208ENST00000511439 PPIAL4EA0A075B759 164 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 ZNF816-ZNF321PA0A0X1KG74 233 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 ZNF860A6NHJ4 632 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 PPIAL4DF5H284 164 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 H0YIV9 168 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 L7N2F9 121 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 PSMD12O00232 456 aaPredicted RBP2.53□□□□□ -2
TOPBP1-208ENST00000511439 TP53I11O14683 189 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 RAMP3O60896 148 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 CDH16O75309 829 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 DEDDO75618 318 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 PPIAL4FP0DN26 164 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 ATP1B2P14415 290 aaPredicted RBP2.53□□□□□ -2
TOPBP1-208ENST00000511439 GALP22466 123 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 IGHV1-2P23083 117 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 MAGEA8P43361 318 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 STARP49675 285 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 CEBPDP49716 269 aaPredicted RBP2.53□□□□□ -2
TOPBP1-208ENST00000511439 CBX1P83916 185 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 PPIDQ08752 370 aaKnown RBP2.53□□□□□ -2
TOPBP1-208ENST00000511439 ASPHQ12797 758 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 BCL2A1Q16548 175 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 DEFB112Q30KQ8 113 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 ZNF658BQ4V348 819 aaPredicted RBP2.53□□□□□ -2
TOPBP1-208ENST00000511439 TIMM23BQ5SRD1 257 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 SLX4IPQ5VYV7 408 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 ZNF57Q68EA5 555 aaPredicted RBP2.53□□□□□ -2
TOPBP1-208ENST00000511439 TIGD3Q6B0B8 471 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 ATL3Q6DD88 541 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 NIPAL1Q6NVV3 410 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 SCYL2Q6P3W7 929 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 CYS1Q717R9 158 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 SERPINA9Q86WD7 417 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 C9orf40Q8IXQ3 194 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 UBQLNLQ8IYU4 475 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 RIBC1Q8N443 379 aaPredicted RBP2.53□□□□□ -2
TOPBP1-208ENST00000511439 DEFB108BQ8NET1 73 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 OR1J4Q8NGS1 313 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 TRMT10AQ8TBZ6 339 aaKnown RBP2.53□□□□□ -2
TOPBP1-208ENST00000511439 ITCHQ96J02 903 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 AKR1E2Q96JD6 320 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 HBEGFQ99075 208 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 ALG12Q9BV10 488 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 SLC25A51Q9H1U9 297 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 IKZF5Q9H5V7 419 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 FOLH1BQ9HBA9 442 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 MRPS30Q9NP92 439 aaKnown RBP2.53□□□□□ -2
TOPBP1-208ENST00000511439 DYNLRB1Q9NP97 96 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 GLRX2Q9NS18 164 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 DDX18Q9NVP1 670 aaKnown RBP2.53□□□□□ -2
TOPBP1-208ENST00000511439 SLC2A6Q9UGQ3 507 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 PCYOX1Q9UHG3 505 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 CLEC4AQ9UMR7 237 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 OR10H1Q9Y4A9 318 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 KIF25-AS1Q9Y6Z4 181 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 HMCN2Q8NDA2 5059 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 DNAH10Q8IVF4 4471 aa2.53□□□□□ -2
TOPBP1-208ENST00000511439 PLECQ15149 4684 aaKnown RBP2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 PVALEFA0A1B0GWK0 134 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 LRRC30A6NM36 301 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 KLLNB2CW77 178 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 LYNX1G3V0Z9 82 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 H0YHG0 523 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 M0R1B8 84 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 WBP4O75554 376 aaKnown RBP2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 CLIC3O95833 236 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 LYNX1P0DP58 116 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 TAGLN2P37802 199 aaKnown RBP2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 PPT1P50897 306 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF83P51522 516 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 TMEM33P57088 247 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 RPL23AP62750 156 aaKnown RBP2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 IGLV3-21P80748 117 aaPredicted RBP2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 RELAQ04206 551 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 CD47Q08722 323 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 SERTAD2Q14140 314 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 RCN1Q15293 331 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 SSX2Q16385 188 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 GLYR1Q49A26 553 aaPredicted RBP2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 PIGGQ5H8A4 983 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF470Q6ECI4 717 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 TRIM40Q6P9F5 258 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 UNQ9370/PRO34162Q6UXP9 181 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 ERASQ7Z444 233 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 SLC22A9Q8IVM8 553 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 SBSPONQ8IVN8 264 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 C11orf53Q8IXP5 236 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms