RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 KCNK15Q9H427 330 aa4.72□□□□□ -1.65
USP53-206ENST00000510737 PIGUQ9H490 435 aa4.72□□□□□ -1.65
USP53-206ENST00000510737 INPP5EQ9NRR6 644 aa4.72□□□□□ -1.65
USP53-206ENST00000510737 TMEM106BQ9NUM4 274 aa4.72□□□□□ -1.65
USP53-206ENST00000510737 EXD2Q9NVH0 621 aa4.72□□□□□ -1.65
USP53-206ENST00000510737 NMRK1Q9NWW6 199 aa4.72□□□□□ -1.65
USP53-206ENST00000510737 SLC17A7Q9P2U7 560 aa4.72□□□□□ -1.65
USP53-206ENST00000510737 SLC7A8Q9UHI5 535 aa4.72□□□□□ -1.65
USP53-206ENST00000510737 ZNF107Q9UII5 783 aaPredicted RBP4.72□□□□□ -1.65
USP53-206ENST00000510737 ZNF225Q9UK10 706 aa4.72□□□□□ -1.65
USP53-206ENST00000510737 TMED7-TICAM2A0A0A6YYA0 188 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 ZSCAN5BA6NJL1 495 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 SYCE1LA8MT33 242 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 ZNF99A8MXY4 864 aaPredicted RBP4.71□□□□□ -1.66
USP53-206ENST00000510737 ZNF208O43345 1280 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 FCMRO60667 390 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 SERPINA5P05154 406 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 TPM3P06753 285 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 ANXA4P09525 319 aaPredicted RBP4.71□□□□□ -1.66
USP53-206ENST00000510737 UBTFL6P0CB48 400 aaPredicted RBP4.71□□□□□ -1.66
USP53-206ENST00000510737 TSPAN8P19075 237 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 ATP6V1C1P21283 382 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 NTSP30990 170 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 UCP2P55851 309 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 SLC35A2P78381 396 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 PDE7AQ13946 482 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 RASA2Q15283 850 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 OR7A5Q15622 319 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 MOGQ16653 247 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 ARHGAP11BQ3KRB8 267 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 GGTA1PQ4G0N0 100 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 TEX35Q5T0J7 233 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 DCST2Q5T1A1 773 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 PDZK1Q5T2W1 519 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 NOXRED1Q6NXP6 359 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 OLIG3Q7RTU3 272 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 GRINAQ7Z429 371 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 CEACAM19Q7Z692 300 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 CMC1Q7Z7K0 106 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 CALHM3Q86XJ0 350 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 RNF130Q86XS8 419 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 PDZD9Q8IXQ8 264 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 Q8N7P7 452 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 RHEBL1Q8TAI7 183 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 C10orf82Q8WW14 230 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 LHX4Q969G2 390 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 TOMM40LQ969M1 308 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 CIDECQ96AQ7 238 aaPredicted RBP4.71□□□□□ -1.66
USP53-206ENST00000510737 THOC1Q96FV9 657 aaKnown RBP4.71□□□□□ -1.66
USP53-206ENST00000510737 GPR22Q99680 433 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 CHID1Q9BWS9 393 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 HRH4Q9H3N8 390 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 PCTPQ9UKL6 214 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 STUB1Q9UNE7 303 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 TMED7Q9Y3B3 224 aa4.71□□□□□ -1.66
USP53-206ENST00000510737 ZNF879B4DU55 563 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 MANBAO00462 879 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 UGT2B17O75795 530 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 OPN1SWP03999 348 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 HMGN2P05204 90 aaKnown RBP4.7□□□□□ -1.66
USP53-206ENST00000510737 CD55P08174 381 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 OR12D1P0DN82 309 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 MDH2P40926 338 aaKnown RBP4.7□□□□□ -1.66
USP53-206ENST00000510737 IDH2P48735 452 aaKnown RBP4.7□□□□□ -1.66
USP53-206ENST00000510737 CDH13P55290 713 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 CLDN17P56750 224 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 RBBP4Q09028 425 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 ZNF141Q15928 474 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 MAPK14Q16539 360 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 ZNF74Q16587 644 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 AP1ARQ63HQ0 302 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 ANKRD26P1Q6NSI1 321 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 SLC27A4Q6P1M0 643 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 EMBQ6PCB8 327 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 ZNF841Q6ZN19 808 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 SZRD1Q7Z422 152 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 COMTD1Q86VU5 262 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 SBSPONQ8IVN8 264 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 SKA3Q8IX90 412 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 CENPLQ8N0S6 344 aaPredicted RBP4.7□□□□□ -1.66
USP53-206ENST00000510737 GPR137CQ8N3F9 429 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 CDC26Q8NHZ8 85 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 ZNF563Q8TA94 476 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 MAGOHBQ96A72 148 aaKnown RBP4.7□□□□□ -1.66
USP53-206ENST00000510737 DDIT4LQ96D03 193 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 MS4A4EQ96PG1 132 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 STACQ99469 402 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 SDF2Q99470 211 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 ARHGDIGQ99819 225 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 ACPTQ9BZG2 426 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 MIEF1Q9NQG6 463 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 ZNRD1Q9P1U0 126 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 CPSF2Q9P2I0 782 aaKnown RBP4.7□□□□□ -1.66
USP53-206ENST00000510737 PCDHGB4Q9UN71 923 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 SNX6Q9UNH7 406 aa4.7□□□□□ -1.66
USP53-206ENST00000510737 DYNC1H1Q14204 4646 aaKnown RBP4.69□□□□□ -1.66
USP53-206ENST00000510737 M0R3G1 203 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 AP3D1O14617 1153 aa4.69□□□□□ -1.66
USP53-206ENST00000510737 DNALI1O14645 258 aaPredicted RBP4.69□□□□□ -1.66
USP53-206ENST00000510737 OR4F21O95013 312 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms