RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 ZNF841Q6ZN19 808 aa12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 ZDHHC22Q8N966 263 aa12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 OR8B12Q8NGG6 310 aa12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 LRRC29Q8WV35 223 aa12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 NRBF2Q96F24 287 aa12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 LYZL4Q96KX0 146 aa12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 MS4A7Q9GZW8 240 aaPredicted RBP12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 SMURF1Q9HCE7 757 aa12.33□□□□□ -0.44
UBE2D3-228ENST00000508974 ZNF850A8MQ14 1090 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 G3V2T6 193 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 PHYHO14832 338 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 FSTL3O95633 263 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 CFL1P23528 166 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 ACKR3P25106 362 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 EPHA2P29317 976 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 PSMB10P40306 273 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 RASSF2P50749 326 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 PSMA6P60900 246 aaKnown RBP12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 FGF12P61328 243 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 PRDX4Q13162 271 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 KCNJ8Q15842 424 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 ATP6AP1Q15904 470 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 LCN1P1Q5VSP4 162 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 KCTD8Q6ZWB6 473 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 RHOUQ7L0Q8 258 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 COMMD2Q86X83 199 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 FAM90A1Q86YD7 464 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 PLPP7Q8NBV4 271 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 OR1M1Q8NGA1 313 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 FAM216AQ8WUB2 273 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 ZFAND2BQ8WV99 257 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 DNAJC9Q8WXX5 260 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 LRTOMTQ8WZ04 291 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 PIGCQ92535 297 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 GCDHQ92947 438 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 SEH1LQ96EE3 360 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 ZNF48Q96MX3 618 aaPredicted RBP12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 TEAD3Q99594 435 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 SEMA6AQ9H2E6 1030 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 ERVK-18Q9QC07 812 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 GTF2A1LQ9UNN4 478 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 COPS3Q9UNS2 423 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 AP4S1Q9Y587 144 aa12.32□□□□□ -0.44
UBE2D3-228ENST00000508974 TRAV38-1A0A0B4J264 116 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 KIR2DS1A0A191URI9 304 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 MDFIC2A0A1B0GVS7 189 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 A0A1B0GW55 424 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 ANXA2P2A6NMY6 339 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 PRR32B1ATL7 298 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 DUX4L2P0CJ85 424 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 DUX4L3P0CJ86 424 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 DUX4L4P0CJ87 422 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 DUX4L5P0CJ88 424 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 DUX4L6P0CJ89 424 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 DUX4L7P0CJ90 424 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 ALOX5APP20292 161 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 FASP25445 335 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 UBA52P62987 128 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 DMRTC1Q5HYR2 192 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 DUX4L9Q6RFH8 374 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 WDR82Q6UXN9 313 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 BRD3OSQ6XYD6 125 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 C11orf53Q8IXP5 236 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 FGFRL1Q8N441 504 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 TCEANCQ8N8B7 351 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 CSNK2A3Q8NEV1 391 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 FAM81AQ8TBF8 368 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 DACT3Q96B18 629 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 MICU1Q9BPX6 476 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 PCGF1Q9BSM1 259 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 YIPF3Q9GZM5 350 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 NIPAL2Q9H841 368 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 DUX4Q9UBX2 424 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 IKZF2Q9UKS7 526 aa12.31□□□□□ -0.44
UBE2D3-228ENST00000508974 TMEM269A0A1B0GVZ9 245 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 DNAJC9-AS1A6NH13 148 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 CDIPTO14735 213 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 TMPRSS2O15393 492 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 MAGEB4O15481 346 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 ENSAO43768 121 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 SFTPBP07988 381 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 CPT2P23786 658 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 ESRRGP62508 458 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 BAMBIQ13145 260 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 KCTD18Q6PI47 426 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 ZDHHC13Q8IUH4 622 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 FTMTQ8N4E7 242 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 ST8SIA4Q92187 359 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 RPL3LQ92901 407 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 UPRTQ96BW1 309 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 ITPKCQ96DU7 683 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 IL4I1Q96RQ9 567 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 CNN2Q99439 309 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 CCL13Q99616 98 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 PKP2Q99959 881 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 RTL8AQ9BWD3 113 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 PRRG3Q9BZD7 231 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 RGCCQ9H4X1 137 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 TRIM36Q9NQ86 728 aa12.3□□□□□ -0.44
UBE2D3-228ENST00000508974 DVL1O14640 695 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms