RNA–Protein interactions for RNA: ENST00000508604.5

NUP54-208, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-208ENST00000508604 CT45A8P0DMV1 189 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 CT45A9P0DMV2 189 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 C1GALT1C1LP0DN25 315 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 HLA-EP13747 358 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 UCHL3P15374 230 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 KCNE1P15382 129 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 ZNF250P15622 560 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 HIST1H1BP16401 226 aaKnown RBP1.39□□□□□ -2.19
NUP54-208ENST00000508604 ZNF25P17030 456 aaPredicted RBP1.39□□□□□ -2.19
NUP54-208ENST00000508604 CSNK2A2P19784 350 aaPredicted RBP1.39□□□□□ -2.19
NUP54-208ENST00000508604 NPR2P20594 1047 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 GSTM3P21266 225 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 BGNP21810 368 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 BCKDHBP21953 392 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 IGHV1-2P23083 117 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 STOMP27105 288 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 CASP1P29466 404 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 CALCRP30988 508 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 EPHX2P34913 555 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 HTR5AP47898 357 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 CYB561P49447 251 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 RGS4P49798 205 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 RAB5CP51148 216 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 CCR8P51685 355 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 PLA2G16P53816 162 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 SLC18A1P54219 525 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 KLF3P57682 345 aaPredicted RBP1.39□□□□□ -2.19
NUP54-208ENST00000508604 DNAJB13P59910 316 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 RAB5BP61020 215 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 RPS6P62753 249 aaKnown RBP1.39□□□□□ -2.19
NUP54-208ENST00000508604 OGDHQ02218 1023 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 BCL2L1Q07817 233 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 TWF1Q12792 350 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 SPP2Q13103 211 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 TAF1AQ15573 450 aaPredicted RBP1.39□□□□□ -2.19
NUP54-208ENST00000508604 OR4D1Q15615 310 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 OR8G1Q15617 311 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 TRAM1Q15629 374 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 ZBTB6Q15916 424 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 ATP6V1FQ16864 119 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 TMEM249Q2WGJ8 235 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 PARP15Q460N3 678 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 C5orf47Q569G3 176 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 CT45A2Q5DJT8 189 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 AVPI1Q5T686 147 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 GPRC6AQ5T6X5 926 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 OGFRL1Q5TC84 451 aaPredicted RBP1.39□□□□□ -2.19
NUP54-208ENST00000508604 APOBEC3HQ6NTF7 200 aaKnown RBP1.39□□□□□ -2.19
NUP54-208ENST00000508604 PLET1Q6UQ28 207 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 ZNF562Q6V9R5 426 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 ZFP2Q6ZN57 461 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 DPY19L2P2Q6ZN68 376 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 MBOAT1Q6ZNC8 495 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 TCF24Q7RTU0 167 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 SLC16A13Q7RTY0 426 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 MRPL21Q7Z2W9 205 aaKnown RBP1.39□□□□□ -2.19
NUP54-208ENST00000508604 GRINAQ7Z429 371 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 FAM220AQ7Z4H9 259 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 HSD17B13Q7Z5P4 300 aaPredicted RBP1.39□□□□□ -2.19
NUP54-208ENST00000508604 LYG2Q86SG7 212 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 SLC22A16Q86VW1 577 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 COMMD7Q86VX2 200 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 SAXO1Q8IYX7 474 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 PUSL1Q8N0Z8 303 aaKnown RBP1.39□□□□□ -2.19
NUP54-208ENST00000508604 ZFP82Q8N141 532 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 CLDN22Q8N7P3 220 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 FADS6Q8N9I5 356 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 CYB561A3Q8NBI2 242 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 COLGALT1Q8NBJ5 622 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 CCNYQ8ND76 341 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 TMEM161BQ8NDZ6 487 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 STXBP6Q8NFX7 210 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 OR4C5Q8NGB2 326 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 OR4M2Q8NGB6 313 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 OR8J3Q8NGG0 315 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 OR6M1Q8NGM8 313 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 OR11L1Q8NGX0 322 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 OR5J2Q8NH18 312 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 TERB2Q8NHR7 220 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 COQ8AQ8NI60 647 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 DYNC2LI1Q8TCX1 351 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 CD200R1Q8TD46 325 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 ZFP90Q8TF47 636 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 DCAKDQ8WVC6 231 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 SELENOMQ8WWX9 145 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 C11orf40Q8WZ69 217 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 RGP1Q92546 391 aaPredicted RBP1.39□□□□□ -2.19
NUP54-208ENST00000508604 SMARCD2Q92925 531 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 SLC38A4Q969I6 547 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 MYLPFQ96A32 169 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 MAGOHBQ96A72 148 aaKnown RBP1.39□□□□□ -2.19
NUP54-208ENST00000508604 CREB3L1Q96BA8 519 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 TM4SF18Q96CE8 201 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 HSFY1Q96LI6 401 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 Q96MT0 163 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 TMEM56Q96MV1 263 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 PRAP1Q96NZ9 151 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 SLC38A2Q96QD8 506 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 PANX1Q96RD7 426 aa1.39□□□□□ -2.19
NUP54-208ENST00000508604 FMO2Q99518 471 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms