RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 C11orf53Q8IXP5 236 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 LYG1Q8N1E2 194 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 Q8N2B8 174 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 FAM216BQ8N7L0 139 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 PAPD5Q8NDF8 572 aaKnown RBP7.64□□□□□ -1.19
NEDD9-211ENST00000508546 OR8J3Q8NGG0 315 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 OR51G2Q8NGK0 314 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 WIPF2Q8TF74 440 aaPredicted RBP7.64□□□□□ -1.19
NEDD9-211ENST00000508546 C12orf43Q96C57 262 aaKnown RBP7.64□□□□□ -1.19
NEDD9-211ENST00000508546 CCDC124Q96CT7 223 aaKnown RBP7.64□□□□□ -1.19
NEDD9-211ENST00000508546 ZNF799Q96GE5 643 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 TPD52L3Q96J77 140 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 TSSK2Q96PF2 358 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 DNTTIP1Q9H147 329 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 SPAG4Q9NPE6 437 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 SERTAD4Q9NUC0 356 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 GID8Q9NWU2 228 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 RHCGQ9UBD6 479 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 CYB5R1Q9UHQ9 305 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 SIGLEC7Q9Y286 467 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 SNX13Q9Y5W8 968 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 RYR1P21817 5038 aa7.64□□□□□ -1.19
NEDD9-211ENST00000508546 J3KTA2 159 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 FXYD1O00168 92 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 ATP6V1G2O95670 118 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 NPPAP01160 153 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 IFNW1P05000 195 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 CD28P10747 220 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 AMY2BP19961 511 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 CD33P20138 364 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 OTX1P32242 354 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-211ENST00000508546 YAP1P46937 504 aaKnown RBP7.63□□□□□ -1.19
NEDD9-211ENST00000508546 CENPAP49450 140 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 RIPK1Q13546 671 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 KPNB1Q14974 876 aaKnown RBP7.63□□□□□ -1.19
NEDD9-211ENST00000508546 RFX4Q33E94 735 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 SNAI3Q3KNW1 292 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 SLC36A3Q495N2 470 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 C8orf82Q6P1X6 216 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-211ENST00000508546 TBPL2Q6SJ96 375 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 DPY19L2P2Q6ZN68 376 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 RRM2BQ7LG56 351 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-211ENST00000508546 LINC00346Q8IVM7 164 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 OR6V1Q8N148 313 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 OR2AJ1Q8NGZ0 328 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 OR2AE1Q8NHA4 323 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 LRRC29Q8WV35 223 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 LZICQ8WZA0 190 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 AJUBAQ96IF1 538 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 CDRT15Q96T59 188 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 CITED2Q99967 270 aaPredicted RBP7.63□□□□□ -1.19
NEDD9-211ENST00000508546 OCSTAMPQ9BR26 566 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 ANKRD19PQ9H560 264 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 OPA3Q9H6K4 179 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 ADA2Q9NZK5 511 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 DNAJB11Q9UBS4 358 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 B9D1Q9UPM9 204 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 SF3B6Q9Y3B4 125 aaKnown RBP7.63□□□□□ -1.19
NEDD9-211ENST00000508546 IER3IP1Q9Y5U9 82 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 DSCAML1Q8TD84 2053 aa7.63□□□□□ -1.19
NEDD9-211ENST00000508546 ACOT8O14734 319 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 CHST1O43916 411 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 TIPRLO75663 272 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 IGLL1P15814 213 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 FAHP16930 419 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 DDOSTP39656 456 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 NAA10P41227 235 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-211ENST00000508546 RPS6KA3P51812 740 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 SLC7A2P52569 658 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 FXYD6P3P58550 94 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 ACTR3P61158 418 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 SAMD4BQ5PRF9 694 aaKnown RBP7.62□□□□□ -1.19
NEDD9-211ENST00000508546 GLYATL3Q5SZD4 288 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 STUMQ69YW2 141 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 HCP5Q6MZN7 132 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 DRAM2Q6UX65 266 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 WDR82Q6UXN9 313 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 DPY19L4Q7Z388 723 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 ARPINQ7Z6K5 226 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 WDR86Q86TI4 376 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 ZBTB46Q86UZ6 589 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 OR56B2PQ8NGI1 322 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 OR5D13Q8NGL4 314 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 PIFOQ8TCI5 191 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 C17orf50Q8WW18 174 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 H1FXQ92522 213 aaKnown RBP7.62□□□□□ -1.19
NEDD9-211ENST00000508546 RORBQ92753 470 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 STMN2Q93045 179 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 SPTSSAQ969W0 71 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 MAP6Q96JE9 813 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 HOPXQ9BPY8 73 aaPredicted RBP7.62□□□□□ -1.19
NEDD9-211ENST00000508546 CDCA4Q9BXL8 241 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 ZNF702PQ9H963 129 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 SRA1Q9HD15 236 aaKnown RBP7.62□□□□□ -1.19
NEDD9-211ENST00000508546 ABCD2Q9UBJ2 740 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 KCNG2Q9UJ96 466 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 PCDHGB5Q9Y5G0 923 aa7.62□□□□□ -1.19
NEDD9-211ENST00000508546 DNAH7Q8WXX0 4024 aa7.61□□□□□ -1.19
NEDD9-211ENST00000508546 LCE6AA0A183 80 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms