RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 IGHV3-20A0A0C4DH32 117 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 C10orf142B7Z368 130 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 H3BML4 177 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 MFNGO00587 321 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 OR8U9P0C7N5 309 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 CDAP32320 146 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 DHPSP49366 369 aaPredicted RBP11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 ZP4Q12836 540 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 TGIF1Q15583 401 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 OR8B12Q8NGG6 310 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 OR8U1Q8NH10 309 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 FBXO17Q96EF6 278 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 SULT4A1Q9BR01 284 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 CHST11Q9NPF2 352 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 GPR84Q9NQS5 396 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 GPR27Q9NS67 375 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 COPS7AQ9UBW8 275 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 OSGIN2Q9Y236 505 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 LHFPL6Q9Y693 200 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 MED12Q93074 2177 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 H3BMH7 237 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 HCKP08631 526 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 ZNF17P17021 662 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 FASLGP48023 281 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 MRPS21P82921 87 aaKnown RBP11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 MFAP5Q13361 173 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 ACTBL2Q562R1 376 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 C1orf189Q5VU69 101 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 Q7L0L9 218 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 ZNF441Q8N8Z8 693 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 OR5D18Q8NGL1 313 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 OR1N1Q8NGS0 311 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 SECTM1Q8WVN6 248 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 NECAB3Q96P71 396 aaPredicted RBP11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 OCSTAMPQ9BR26 566 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 SMIM3Q9BZL3 60 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 RNF122Q9H9V4 155 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 PRUNE2Q8WUY3 3088 aa11.86□□□□□ -0.51
SNCAIP-209ENST00000508017 TLCD2A6NGC4 264 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 METTL12A8MUP2 240 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 LINC00587B1AMM8 73 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 KNG1P01042 644 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 OPN1LWP04000 364 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 ZNF708P17019 499 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 PTGER4P35408 488 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 SULT1A2P50226 295 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 FBXW4P57775 412 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 HGFACQ04756 655 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 TMEM268Q5VZI3 342 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 Q6ZRG5 221 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 MFSD8Q8NHS3 518 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 KCNG3Q8TAE7 436 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 THAP3Q8WTV1 239 aaPredicted RBP11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 DAZLQ92904 295 aaKnown RBP11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 KLHDC7BQ96G42 594 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 KIRREL1Q96J84 757 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 NAA11Q9BSU3 229 aaPredicted RBP11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 SLC2A4RGQ9NR83 387 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 EHFQ9NZC4 300 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 DNAJB11Q9UBS4 358 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 CACFD1Q9UGQ2 172 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 SUSD2Q9UGT4 822 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 WDR87Q6ZQQ6 2873 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 ADAMTS9Q9P2N4 1935 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 EXPH5Q8NEV8 1989 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 A0A1W2PPE3 182 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 C5orf63A6NC05 138 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 CPT2P23786 658 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 OR3A2P47893 321 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 PPT1P50897 306 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 SNU13P55769 128 aaKnown RBP11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 ZNF121P58317 390 aaPredicted RBP11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 RAB5BP61020 215 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 CSNK2A1P68400 391 aaPredicted RBP11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 ECH1Q13011 328 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 FAM76BQ5HYJ3 339 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 GALNTL5Q7Z4T8 443 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 C1QL2Q7Z5L3 287 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 CSNK2A3Q8NEV1 391 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 LMX1AQ8TE12 382 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 NPRL2Q8WTW4 380 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 HIST1H2BAQ96A08 127 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 GPER1Q99527 375 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 ZNF304Q9HCX3 659 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 SMCO4Q9NRQ5 59 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 FBXL17Q9UF56 701 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 POLR1DQ9Y2S0 133 aa11.85□□□□□ -0.51
SNCAIP-209ENST00000508017 IGKV1-9A0A0C4DH69 117 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 FOLR2P14207 255 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 DRD1P21728 446 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 PTAFRP25105 342 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 LAP3P28838 519 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 BLKP51451 505 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 HYAL1Q12794 435 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 FOXF1Q12946 379 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 CLEC9AQ6UXN8 241 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 DEFB119Q8N690 84 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 VN1R1Q9GZP7 353 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 B3GAT1Q9P2W7 334 aa11.84□□□□□ -0.51
SNCAIP-209ENST00000508017 E9PLN8 166 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms