RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 LSM2Q9Y333 95 aaKnown RBP17.13■□□□□ 0.33
USP53-203ENST00000507597 C5orf63A6NC05 138 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 TRIM64A6NGJ6 449 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 GATBO75879 557 aaKnown RBP17.12■□□□□ 0.33
USP53-203ENST00000507597 PSMA1P25786 263 aaKnown RBP17.12■□□□□ 0.33
USP53-203ENST00000507597 TESK1Q15569 626 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 DEFB113Q30KQ7 82 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 CLVS2Q5SYC1 327 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 CELF2-AS1Q8N7Q2 184 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 RPS4Y2Q8TD47 263 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 IGFBPL1Q8WX77 278 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 PIGCQ92535 297 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 GHSRQ92847 366 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 RNF166Q96A37 237 aaPredicted RBP17.12■□□□□ 0.33
USP53-203ENST00000507597 OR5M11Q96RB7 305 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 MICU1Q9BPX6 476 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 PDCD1LG2Q9BQ51 273 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 GSX2Q9BZM3 304 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 MSL2Q9HCI7 577 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 MYOZ1Q9NP98 299 aaPredicted RBP17.12■□□□□ 0.33
USP53-203ENST00000507597 PLCE1Q9P212 2302 aa17.12■□□□□ 0.33
USP53-203ENST00000507597 CD55P08174 381 aa17.11■□□□□ 0.33
USP53-203ENST00000507597 OCM2P0CE71 109 aa17.11■□□□□ 0.33
USP53-203ENST00000507597 OCMP0CE72 109 aaPredicted RBP17.11■□□□□ 0.33
USP53-203ENST00000507597 CA6P23280 308 aa17.11■□□□□ 0.33
USP53-203ENST00000507597 MAPK3P27361 379 aaPredicted RBP17.11■□□□□ 0.33
USP53-203ENST00000507597 CDKN1AP38936 164 aa17.11■□□□□ 0.33
USP53-203ENST00000507597 MAP2K4P45985 399 aa17.11■□□□□ 0.33
USP53-203ENST00000507597 EFNA4P52798 201 aa17.11■□□□□ 0.33
USP53-203ENST00000507597 ATP5J2P56134 94 aa17.11■□□□□ 0.33
USP53-203ENST00000507597 TNFAIP6P98066 277 aaPredicted RBP17.11■□□□□ 0.33
USP53-203ENST00000507597 KRT74Q7RTS7 529 aa17.11■□□□□ 0.33
USP53-203ENST00000507597 ZDHHC23Q8IYP9 409 aa17.11■□□□□ 0.33
USP53-203ENST00000507597 RDH10Q8IZV5 341 aa17.11■□□□□ 0.33
USP53-203ENST00000507597 ADAT1Q9BUB4 502 aaKnown RBP17.11■□□□□ 0.33
USP53-203ENST00000507597 CXXC4Q9H2H0 198 aa17.11■□□□□ 0.33
USP53-203ENST00000507597 SLC7A11Q9UPY5 501 aa17.11■□□□□ 0.33
USP53-203ENST00000507597 ROS1P08922 2347 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 RAI1Q7Z5J4 1906 aaPredicted RBP17.1■□□□□ 0.33
USP53-203ENST00000507597 MAGEA13PA6NCF6 341 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 IFNL4K9M1U5 179 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 F12P00748 615 aaPredicted RBP17.1■□□□□ 0.33
USP53-203ENST00000507597 NRASP01111 189 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 IGHV1-46P01743 117 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 TPBGQ13641 420 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 UBE2UQ5VVX9 321 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 SERPINA12Q8IW75 414 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 OR5D14Q8NGL3 314 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 NRGNQ92686 78 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 ERGIC1Q969X5 290 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 RTL8AQ9BWD3 113 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 TPK1Q9H3S4 243 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 SAP30LQ9HAJ7 183 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 ZNF275Q9NSD4 429 aaPredicted RBP17.1■□□□□ 0.33
USP53-203ENST00000507597 RHBDD3Q9Y3P4 386 aa17.1■□□□□ 0.33
USP53-203ENST00000507597 DSCAMO60469 2012 aa17.09■□□□□ 0.33
USP53-203ENST00000507597 A0A1B0GWJ7 208 aa17.09■□□□□ 0.33
USP53-203ENST00000507597 ZSCAN5BA6NJL1 495 aa17.09■□□□□ 0.33
USP53-203ENST00000507597 LALBAP00709 142 aa17.09■□□□□ 0.33
USP53-203ENST00000507597 CSF3P09919 207 aa17.09■□□□□ 0.33
USP53-203ENST00000507597 CPEP16870 476 aa17.09■□□□□ 0.33
USP53-203ENST00000507597 ACKR3P25106 362 aa17.09■□□□□ 0.33
USP53-203ENST00000507597 PTH2RP49190 550 aa17.09■□□□□ 0.33
USP53-203ENST00000507597 MRPS11P82912 194 aaKnown RBP17.09■□□□□ 0.33
USP53-203ENST00000507597 PRDX4Q13162 271 aa17.09■□□□□ 0.33
USP53-203ENST00000507597 CNN3Q15417 329 aaKnown RBP17.09■□□□□ 0.33
USP53-203ENST00000507597 TSTQ16762 297 aaKnown RBP17.09■□□□□ 0.33
USP53-203ENST00000507597 Q499Y3 187 aa17.09■□□□□ 0.33
USP53-203ENST00000507597 ARMCX4Q5H9R4 360 aa17.09■□□□□ 0.33
USP53-203ENST00000507597 XAF1Q6GPH4 301 aa17.09■□□□□ 0.33
USP53-203ENST00000507597 ZFP41Q8N8Y5 198 aa17.09■□□□□ 0.33
USP53-203ENST00000507597 CKLFQ9UBR5 152 aa17.09■□□□□ 0.33
USP53-203ENST00000507597 PNMA8CA0A1B0GUJ8 204 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 TMEM210A6NLX4 147 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 ZNF850A8MQ14 1090 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 FAHP16930 419 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 PCMT1P22061 227 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 ANOS1P23352 680 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 PSMB9P28065 219 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 PRSS12P56730 875 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 DSCR9P59020 149 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 CEACAM21Q3KPI0 293 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 Q6ZR03 302 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 KCTD8Q6ZWB6 473 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 MOB3CQ70IA8 216 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 OR5A2Q8NGI9 324 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 FGGYQ96C11 551 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 CPNE2Q96FN4 548 aaPredicted RBP17.08■□□□□ 0.32
USP53-203ENST00000507597 SORCS2Q96PQ0 1159 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 DLL4Q9NR61 685 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 CRYBG3Q68DQ2 2970 aa17.08■□□□□ 0.32
USP53-203ENST00000507597 ANKRD61A6NGH8 418 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 OR5B21A6NL26 309 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 MAGEB3O15480 346 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 PRKACBP22694 351 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 CD200P41217 278 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 CCL8P80075 99 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 TNK1Q13470 666 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 TMEM255AQ5JRV8 349 aa17.07■□□□□ 0.32
USP53-203ENST00000507597 LIPKQ5VXJ0 399 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms