RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 TMEM9BQ9NQ34 198 aa2.05□□□□□ -2.08
SSBP2-206ENST00000506960 FAM49BQ9NUQ9 324 aa2.05□□□□□ -2.08
SSBP2-206ENST00000506960 TMED5Q9Y3A6 229 aa2.05□□□□□ -2.08
SSBP2-206ENST00000506960 CSDC2Q9Y534 153 aaKnown RBP2.05□□□□□ -2.08
SSBP2-206ENST00000506960 ABCB11O95342 1321 aa2.05□□□□□ -2.08
SSBP2-206ENST00000506960 SCN8AQ9UQD0 1980 aa2.05□□□□□ -2.08
SSBP2-206ENST00000506960 CITO14578 2027 aa2.05□□□□□ -2.08
SSBP2-206ENST00000506960 SVILO95425 2214 aa2.05□□□□□ -2.08
SSBP2-206ENST00000506960 HIVEP1P15822 2718 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 SMCO3A2RU48 225 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 LSM1O15116 133 aaKnown RBP2.04□□□□□ -2.08
SSBP2-206ENST00000506960 RAD51BO15315 384 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 FOXH1O75593 365 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 CLPXO76031 633 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 ADRA2AP08913 450 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 CISD3P0C7P0 127 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 UBTFL6P0CB48 400 aaPredicted RBP2.04□□□□□ -2.08
SSBP2-206ENST00000506960 GOLGA8HP0CJ92 632 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 IGHV1-8P0DP01 117 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 ZNF43P17038 809 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 SLC11A1P49279 550 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 TMED10P49755 219 aaKnown RBP2.04□□□□□ -2.08
SSBP2-206ENST00000506960 RGNQ15493 299 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 PPM1LQ5SGD2 360 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 DNAJC24Q6P3W2 148 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 ZBED9Q6R2W3 1325 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 ZNF561Q8N587 486 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 DEFB119Q8N690 84 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 OR56B2PQ8NGI1 322 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 PPTC7Q8NI37 304 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 FGF13Q92913 245 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 NTAN1Q96AB6 310 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 CLDN23Q96B33 292 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 RBMXL1Q96E39 390 aaKnown RBP2.04□□□□□ -2.08
SSBP2-206ENST00000506960 LINC00477Q96M19 166 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 PLIN4Q96Q06 1357 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 PLIN2Q99541 437 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 PRORYQ9H606 182 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 HMG20AQ9NP66 347 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 FGF20Q9NP95 211 aaPredicted RBP2.04□□□□□ -2.08
SSBP2-206ENST00000506960 GPATCH2LQ9NWQ4 482 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 ZNRD1Q9P1U0 126 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 IGSF9BQ9UPX0 1349 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 PSG8Q9UQ74 426 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 ZNF835Q9Y2P0 537 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 TMEM14AQ9Y6G1 99 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 IKBKGQ9Y6K9 419 aa2.04□□□□□ -2.08
SSBP2-206ENST00000506960 APCP25054 2843 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 IGHV5-10-1A0A0J9YXX1 117 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 A0A1B0GVX0 72 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 C7orf66A4D0T2 115 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 SPECC1L-ADORA2AF8WAN1 911 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 BET1O15155 118 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 RBFOX2O43251 390 aaKnown RBP eCLIP2.03□□□□□ -2.08
SSBP2-206ENST00000506960 RDH16O75452 317 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 SRP72O76094 671 aaKnown RBP2.03□□□□□ -2.08
SSBP2-206ENST00000506960 ACSM4P0C7M7 580 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 RAB3BP20337 219 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 CSRP1P21291 193 aaKnown RBP2.03□□□□□ -2.08
SSBP2-206ENST00000506960 F2RP25116 425 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 FOXN2P32314 431 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 PMELP40967 661 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 AQP2P41181 271 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 NSG1P42857 185 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 CXCL12P48061 93 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 CX3CR1P49238 355 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 ADARB1P78563 741 aaKnown RBP2.03□□□□□ -2.08
SSBP2-206ENST00000506960 SEMG2Q02383 582 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 SYCNQ0VAF6 134 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 PON2Q15165 354 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 SNRNP35Q16560 246 aaKnown RBP2.03□□□□□ -2.08
SSBP2-206ENST00000506960 SMUG1Q53HV7 270 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 SPECC1LQ69YQ0 1117 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 SLC8B1Q6J4K2 584 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 CEMP1Q6PRD7 247 aaPredicted RBP2.03□□□□□ -2.08
SSBP2-206ENST00000506960 DUX4L9Q6RFH8 374 aaPredicted RBP2.03□□□□□ -2.08
SSBP2-206ENST00000506960 ARL9Q6T311 187 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 PLET1Q6UQ28 207 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 Q6ZR03 302 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 CDR2LQ86X02 465 aaPredicted RBP2.03□□□□□ -2.08
SSBP2-206ENST00000506960 CALHM1Q8IU99 346 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 CDH26Q8IXH8 852 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 LGI3Q8N145 548 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 TCEAL4Q96EI5 215 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 SPIN2AQ99865 258 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 MICU1Q9BPX6 476 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 SPIN2BQ9BPZ2 258 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 NUP58Q9BVL2 599 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 SYNDIG1Q9H7V2 258 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 C12orf10Q9HB07 376 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 PXMP2Q9NR77 195 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 ZNF355PQ9NSJ1 428 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 ST3GAL6Q9Y274 331 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 MTORP42345 2549 aa2.03□□□□□ -2.08
SSBP2-206ENST00000506960 FBN1P35555 2871 aaKnown RBP2.03□□□□□ -2.08
SSBP2-206ENST00000506960 HIVEP3Q5T1R4 2406 aa2.02□□□□□ -2.09
SSBP2-206ENST00000506960 KNL1Q8NG31 2342 aa2.02□□□□□ -2.09
SSBP2-206ENST00000506960 SHANK1Q9Y566 2161 aa2.02□□□□□ -2.09
SSBP2-206ENST00000506960 NID2Q14112 1375 aa2.02□□□□□ -2.09
SSBP2-206ENST00000506960 TMEM223A0PJW6 202 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms