RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 UBASH3BQ8TF42 649 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 SPRYD4Q8WW59 207 aaPredicted RBP4.84□□□□□ -1.63
USP46-206ENST00000506707 SGCDQ92629 289 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 RDH5Q92781 318 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 YIPF5Q969M3 257 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 MEGF10Q96KG7 1140 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 C4orf36Q96KX1 117 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 CNBD2Q96M20 576 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 Q96MF0 132 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 DIRC2Q96SL1 478 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 ZNF184Q99676 751 aaPredicted RBP4.84□□□□□ -1.63
USP46-206ENST00000506707 ALG8Q9BVK2 526 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 RASSF4Q9H2L5 321 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 DUSP21Q9H596 190 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 GPR84Q9NQS5 396 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 ACOXLQ9NUZ1 547 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 PAK1IP1Q9NWT1 392 aaPredicted RBP4.84□□□□□ -1.63
USP46-206ENST00000506707 UBAP1Q9NZ09 502 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 MRPL15Q9P015 296 aaKnown RBP4.84□□□□□ -1.63
USP46-206ENST00000506707 IL19Q9UHD0 177 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 ZNF391Q9UJN7 358 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 DIMT1Q9UNQ2 313 aaKnown RBP4.84□□□□□ -1.63
USP46-206ENST00000506707 CAB39Q9Y376 341 aaPredicted RBP4.84□□□□□ -1.63
USP46-206ENST00000506707 RHBDD3Q9Y3P4 386 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 CACNG2Q9Y698 323 aa4.84□□□□□ -1.63
USP46-206ENST00000506707 MAP1AP78559 2803 aaPredicted RBP4.84□□□□□ -1.63
USP46-206ENST00000506707 DSCAMO60469 2012 aa4.84□□□□□ -1.64
USP46-206ENST00000506707 CCDC168Q8NDH2 2452 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 IGHV4-30-2A0A087WSY4 118 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 A0A096LNT2 108 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 IGHV1-69-2A0A0G2JMI3 117 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 LOC100289279A0A1B0GTE1 492 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 LOC390937A0A1W2PQ73 354 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 TRIM64A6NGJ6 449 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 TRIM64BA6NI03 449 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 OR4C45A6NMZ5 311 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 VWC2LB2RUY7 222 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 F5H5P2 479 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 P2RY10O00398 339 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 GMDSO60547 372 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 CDC14BO60729 498 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 PTBP3O95758 552 aaKnown RBP4.83□□□□□ -1.64
USP46-206ENST00000506707 LALBAP00709 142 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 CST4P01036 141 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 ISG15P05161 165 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 CDK1P06493 297 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 ERCC1P07992 297 aaPredicted RBP4.83□□□□□ -1.64
USP46-206ENST00000506707 CCDC159P0C7I6 412 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 ATP6V1B1P15313 513 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 CCL1P22362 96 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 CRHBPP24387 322 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 GIFP27352 417 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 PMELP40967 661 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 CCR9P51686 369 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 GTF2A1P52655 376 aaPredicted RBP4.83□□□□□ -1.64
USP46-206ENST00000506707 TMEM33P57088 247 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 DSCR9P59020 149 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 SLC35A2P78381 396 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 TNFAIP6P98066 277 aaPredicted RBP4.83□□□□□ -1.64
USP46-206ENST00000506707 HNRNPA0Q13151 305 aaKnown RBP4.83□□□□□ -1.64
USP46-206ENST00000506707 RIN1Q13671 783 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 ALKBH1Q13686 389 aaKnown RBP4.83□□□□□ -1.64
USP46-206ENST00000506707 SNCBQ16143 134 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 ODF4Q2M2E3 257 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 ZMAT1Q5H9K5 638 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 BCL2L15Q5TBC7 163 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 RNLSQ5VYX0 342 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 TMEM42Q69YG0 159 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 XAF1Q6GPH4 301 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 AHSA2Q719I0 299 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 KLBQ86Z14 1044 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 NANOGP1Q8N7R0 232 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 ZNF540Q8NDQ6 660 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 OR10AD1Q8NGE0 317 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 RPS4Y2Q8TD47 263 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 ITLN1Q8WWA0 313 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 GATAD2BQ8WXI9 593 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 FAM168AQ92567 244 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 ITFG2Q969R8 447 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 ELMOD3Q96FG2 381 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 MRPL48Q96GC5 212 aaKnown RBP4.83□□□□□ -1.64
USP46-206ENST00000506707 POM121Q96HA1 1249 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 FAM71F1Q96KD3 344 aaPredicted RBP4.83□□□□□ -1.64
USP46-206ENST00000506707 OR2V2Q96R30 315 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 CDCA4Q9BXL8 241 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 SLC22A4Q9H015 551 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 MOB1AQ9H8S9 216 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 SAP30LQ9HAJ7 183 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 MYOZ1Q9NP98 299 aaPredicted RBP4.83□□□□□ -1.64
USP46-206ENST00000506707 DLL4Q9NR61 685 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 DECR2Q9NUI1 292 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 BABAM2Q9NXR7 383 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 TREM2Q9NZC2 230 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 ERVK-18Q9QC07 812 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 GTF2A1LQ9UNN4 478 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 EXOSC1Q9Y3B2 195 aaKnown RBP4.83□□□□□ -1.64
USP46-206ENST00000506707 SIRT4Q9Y6E7 314 aaPredicted RBP4.83□□□□□ -1.64
USP46-206ENST00000506707 V9GYS6 101 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 MAST4O15021 2626 aa4.83□□□□□ -1.64
USP46-206ENST00000506707 IGHV3-64DA0A0J9YX35 117 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms