RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 OR13C9Q8NGT0 318 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 ERGIC1Q969X5 290 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 CYYR1Q96J86 154 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 C1orf147Q96MC9 270 aaPredicted RBP15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 BCAT2O15382 392 aaPredicted RBP15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 TTRP02766 147 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 ZNF93P35789 620 aaPredicted RBP15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 FHITP49789 147 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 ZNF117Q03924 483 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 RPUSD3Q6P087 351 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 RNF144BQ7Z419 303 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 LINC00346Q8IVM7 164 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 OR5D14Q8NGL3 314 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 EMG1Q92979 244 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 MR1Q95460 341 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 TSACCQ96A04 125 aaPredicted RBP15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 MUCL1Q96DR8 90 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 RTN4RQ9BZR6 473 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 C1orf123Q9NWV4 160 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 FAM206AQ9NX38 181 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 DOK5Q9P104 306 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 PRODH2Q9UF12 536 aa15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 TMEM184BQ9Y519 407 aaPredicted RBP15.14■□□□□ 0.01
SQSTM1-211ENST00000506690 CACNA1IQ9P0X4 2223 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 A0A1B0GV90 55 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 WISP1O95388 367 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 ZNF823P16415 610 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 RPS10P46783 165 aaKnown RBP15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 SLC6A8P48029 635 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 CLINT1Q14677 625 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 PHOSPHO2Q8TCD6 241 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 RHOVQ96L33 236 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 C19orf12Q9NSK7 152 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 B3GALT5Q9Y2C3 310 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 TMEM131Q92545 1883 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 GMFGO60234 142 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 SLC2A1P11166 492 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 AMY2BP19961 511 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 PTGER4P35408 488 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 CAMLGP49069 296 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 RBP2P50120 134 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 SEC13P55735 322 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 GINS3Q9BRX5 216 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 PLEKHA2Q9HB19 425 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 FAM60AQ9NP50 221 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 GFOD1Q9NXC2 390 aa15.13■□□□□ 0.01
SQSTM1-211ENST00000506690 A0A1B0GW64 132 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 A8MVM7 634 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 SOX1O00570 391 aaPredicted RBP15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 SYT7O43581 403 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 CDC14BO60729 498 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 MPIG6BO95866 241 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 FCARP24071 287 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 ZNF84P51523 738 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 NDUFA6P56556 154 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 SLC35A1P78382 337 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 FOXK1P85037 733 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 SURF2Q15527 256 aaPredicted RBP15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 DEFB110Q30KQ9 67 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 GLIPR1L1Q6UWM5 242 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 SSX9Q7RTT3 188 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 RNF133Q8WVZ7 376 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 GALNT14Q96FL9 552 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 PBDC1Q9BVG4 233 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 FOXQ1Q9C009 403 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 HRASLS2Q9NWW9 162 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 FBXO7Q9Y3I1 522 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 ARID1AO14497 2285 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 SDCBPO00560 298 aaPredicted RBP15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 NPIPB7O75200 414 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 H2BFMP0C1H6 154 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 BCKDHBP21953 392 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 PPP1CAP62136 330 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 ZNF124Q15973 351 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 DNLZQ5SXM8 178 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 FIP1L1Q6UN15 594 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 KCNG3Q8TAE7 436 aa15.12■□□□□ 0.01
SQSTM1-211ENST00000506690 CLDN4O14493 209 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 PLPP3O14495 311 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 OR13C7P0DN81 318 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 OR3A2P47893 321 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 C19orf47Q8N9M1 422 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 FNDC9Q8TBE3 224 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 CPNE4Q96A23 557 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 BSCL2Q96G97 398 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 ARHGAP5-AS1Q96IT6 56 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 CENPMQ9NSP4 180 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 SUSD2Q9UGT4 822 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 MRPS28Q9Y2Q9 187 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 STRAPQ9Y3F4 350 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 RPL36A-HNRNPH2H7BZ11 118 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 HCRTR2O43614 444 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 CHATP28329 748 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 RBMXP38159 391 aaKnown RBP15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 NFATC4Q14934 902 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 ZNF776Q68DI1 518 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 REC114Q7Z4M0 266 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 LRRC18Q8N456 261 aa15.11■□□□□ 0.01
SQSTM1-211ENST00000506690 PATE1Q8WXA2 126 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms