RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 SNCBQ16143 134 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 OCLNQ16625 522 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 SLC25A30Q5SVS4 291 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 BCL2L15Q5TBC7 163 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 FAM220AQ7Z4H9 259 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 C1orf87Q8N0U7 546 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 FTMTQ8N4E7 242 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 CELF2-AS1Q8N7Q2 184 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 SPERTQ8NA61 448 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 OR11L1Q8NGX0 322 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 ZDHHC16Q969W1 377 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 C8orf4Q9NR00 106 aa11.03□□□□□ -0.64
TCOF1-209ENST00000506630 NUFIP1Q9UHK0 495 aaKnown RBP11.03□□□□□ -0.64
TCOF1-209ENST00000506630 A6NLC8 198 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 B4DSR2 109 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 DLGAP1O14490 977 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 SLC16A6O15403 523 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 FAM20BO75063 409 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 ZNF205O95201 554 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 GRPP07492 148 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 GABRB1P18505 474 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 ACKR3P25106 362 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 SRP14P37108 136 aaKnown RBP11.02□□□□□ -0.65
TCOF1-209ENST00000506630 ACTC1P68032 377 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 ACTA1P68133 377 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 ELF3P78545 371 aaPredicted RBP11.02□□□□□ -0.65
TCOF1-209ENST00000506630 IL5RAQ01344 420 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 ZNF85Q03923 595 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 ZMYND11Q15326 602 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 MPPED2Q15777 294 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 ZNF181Q2M3W8 571 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 CR1LQ2VPA4 569 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 KLBQ86Z14 1044 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 SPICQ8N5J4 248 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 PACRGLQ8N7B6 248 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 OR51F2Q8NH61 342 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 OR51E1Q8TCB6 317 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 CYGBQ8WWM9 190 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 PIGCQ92535 297 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 ERGIC1Q969X5 290 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 C1orf159Q96HA4 380 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 FAM71F1Q96KD3 344 aaPredicted RBP11.02□□□□□ -0.65
TCOF1-209ENST00000506630 Q96MT0 163 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 FN3KRPQ9HA64 309 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 G6PC2Q9NQR9 355 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 GPR84Q9NQS5 396 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 C14orf119Q9NWQ9 140 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 GNG8Q9UK08 70 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 OR52A1Q9UKL2 312 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 PCDHB10Q9UN67 800 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 RHBDD3Q9Y3P4 386 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 SNX5Q9Y5X3 404 aa11.02□□□□□ -0.65
TCOF1-209ENST00000506630 hCG_1807616A0A1W2PRN6 198 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 METTL15A6NJ78 407 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 ANXA2P2A6NMY6 339 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 ZNF850A8MQ14 1090 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 SRSF10O75494 262 aaKnown RBP11.01□□□□□ -0.65
TCOF1-209ENST00000506630 TTRP02766 147 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 MSMBP08118 114 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 CFPP27918 469 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 MDH2P40926 338 aaKnown RBP11.01□□□□□ -0.65
TCOF1-209ENST00000506630 PMELP40967 661 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 MAP2K3P46734 347 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 ZNF91Q05481 1191 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 PRDX4Q13162 271 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 ODF4Q2M2E3 257 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 TMEM155Q4W5P6 130 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 TP53I3Q53FA7 332 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 FAM201AQ5SY85 155 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 GLCCI1Q86VQ1 547 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 MUC20Q8N307 709 aaPredicted RBP11.01□□□□□ -0.65
TCOF1-209ENST00000506630 KLHL36Q8N4N3 616 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 BOLLQ8N9W6 283 aaKnown RBP11.01□□□□□ -0.65
TCOF1-209ENST00000506630 RHOXF1Q8NHV9 184 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 Q8TCH9 128 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 PPP1R14AQ96A00 147 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 LGALS12Q96DT0 336 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 MICU1Q9BPX6 476 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 PPP1R3EQ9H7J1 279 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 DCLRE1BQ9H816 532 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 C1orf123Q9NWV4 160 aa11.01□□□□□ -0.65
TCOF1-209ENST00000506630 ZNF816-ZNF321PA0A0X1KG74 233 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 DAPL1A0PJW8 107 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 P2RY10O00398 339 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 CASQ2O14958 399 aaPredicted RBP11□□□□□ -0.65
TCOF1-209ENST00000506630 SULT1C4O75897 302 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 DHRS3O75911 302 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 PTBP3O95758 552 aaKnown RBP11□□□□□ -0.65
TCOF1-209ENST00000506630 CLIC3O95833 236 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 IGLV3-1P01715 115 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 DBTP11182 482 aaKnown RBP11□□□□□ -0.65
TCOF1-209ENST00000506630 DVL1P1P54792 670 aaPredicted RBP11□□□□□ -0.65
TCOF1-209ENST00000506630 OGFRL1Q5TC84 451 aaPredicted RBP11□□□□□ -0.65
TCOF1-209ENST00000506630 TTC23Q5W5X9 447 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 KCTD8Q6ZWB6 473 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 THAP5Q7Z6K1 395 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 LRRC28Q86X40 367 aaPredicted RBP11□□□□□ -0.65
TCOF1-209ENST00000506630 ZDHHC23Q8IYP9 409 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 ELMOD2Q8IZ81 293 aa11□□□□□ -0.65
TCOF1-209ENST00000506630 DHRSXQ8N5I4 330 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms