RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 OR3A4PP47883 348 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 RNASE10Q5GAN6 216 aaKnown RBP15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 TSPO2Q5TGU0 170 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 SLC36A1Q7Z2H8 476 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 TRAPPC6BQ86SZ2 158 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 FAM89BQ8N5H3 189 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 APH1AQ96BI3 265 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 RAB3CQ96E17 227 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 SOX7Q9BT81 388 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 ASCL3Q9NQ33 180 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 PYCARD-AS1I3L0S3 204 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 MPIG6BO95866 241 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 HPXP02790 462 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 LCATP04180 440 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 CELA3AP09093 270 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 HIST1H1DP16402 221 aaKnown RBP15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 RAD52P43351 418 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 GNG2P59768 71 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 RPS27AP62979 156 aaKnown RBP15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 SRYQ05066 204 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 FAAP20Q6NZ36 180 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 POM121Q96HA1 1249 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 TM2D1Q9BX74 207 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 KLK13Q9UKR3 277 aa15.09■□□□□ 0.01
TRAPPC11-204ENST00000505676 E9PLN8 166 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 DBHP09172 617 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 FAHP16930 419 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 NAT1P18440 290 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 C4BPBP20851 252 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 RAP2BP61225 183 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 MPPED2Q15777 294 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 SNAI3Q3KNW1 292 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 CLVS2Q5SYC1 327 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 LHFPL2Q6ZUX7 228 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 SKA3Q8IX90 412 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 NKX3-1Q99801 234 aaPredicted RBP15.08■□□□□ 0
TRAPPC11-204ENST00000505676 IRF2BPLQ9H1B7 796 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 ZDHHC11Q9H8X9 412 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 DLL4Q9NR61 685 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 ZNF69Q9UC07 566 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 ZNF780AO75290 641 aaPredicted RBP15.08■□□□□ 0
TRAPPC11-204ENST00000505676 AMY2AP04746 511 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 CPT2P23786 658 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 ARR3P36575 388 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 GK2Q14410 553 aaPredicted RBP15.08■□□□□ 0
TRAPPC11-204ENST00000505676 SF3B4Q15427 424 aaKnown RBP eCLIP15.08■□□□□ 02e-6■■■■□ 22.6
TRAPPC11-204ENST00000505676 UBE2V2Q15819 145 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 TMEM42Q69YG0 159 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 BPIFB2Q8N4F0 458 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 ZDHHC22Q8N966 263 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 BEST4Q8NFU0 473 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 OR8S1Q8NH09 359 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 SPSB4Q96A44 273 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 C1QTNF5Q9BXJ0 243 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 SELENOIQ9C0D9 397 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 OPA3Q9H6K4 179 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 PCDHB16Q9NRJ7 776 aa15.08■□□□□ 0
TRAPPC11-204ENST00000505676 TRGV5A0A0B4J1U4 118 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 CRTAPO75718 401 aaPredicted RBP15.07■□□□□ 0
TRAPPC11-204ENST00000505676 RLN1P04808 185 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 CXCL3P19876 107 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 ANXA7P20073 488 aaKnown RBP15.07■□□□□ 0
TRAPPC11-204ENST00000505676 RFC3P40938 356 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 IGFL2Q6UWQ7 119 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 IDO2Q6ZQW0 420 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 OR4D10Q8NGI6 311 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 ZNF431Q8TF32 576 aaPredicted RBP15.07■□□□□ 0
TRAPPC11-204ENST00000505676 TNFAIP8L1Q8WVP5 186 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 SLC39A7Q92504 469 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 LDAHQ9H6V9 325 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 ZNF552Q9H707 407 aaPredicted RBP15.07■□□□□ 0
TRAPPC11-204ENST00000505676 GLRX2Q9NS18 164 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 SLC7A10Q9NS82 523 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 MYEF2Q9P2K5 600 aaKnown RBP15.07■□□□□ 0
TRAPPC11-204ENST00000505676 COL6A3P12111 3177 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 NCOA6Q14686 2063 aaPredicted RBP15.07■□□□□ 0
TRAPPC11-204ENST00000505676 PCNX2A6NKB5 2137 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 BDP1A6H8Y1 2624 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 TMEM82A0PJX8 343 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 MEIS3P1A6NDR6 274 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 SERPINE3A8MV23 424 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 ZNF735P0CB33 412 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 OR8B8Q15620 311 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 FAHD2BQ6P2I3 314 aaPredicted RBP15.07■□□□□ 0
TRAPPC11-204ENST00000505676 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.07■□□□□ 0
TRAPPC11-204ENST00000505676 TUSC5Q8IXB3 177 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 FAHD2AQ96GK7 314 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 GAL3ST1Q99999 423 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 MGAT4CQ9UBM8 478 aa15.07■□□□□ 0
TRAPPC11-204ENST00000505676 MED12Q93074 2177 aa15.06■□□□□ 0
TRAPPC11-204ENST00000505676 SPAARA0A1B0GVQ0 90 aa15.06■□□□□ 0
TRAPPC11-204ENST00000505676 RGS11O94810 467 aa15.06■□□□□ 0
TRAPPC11-204ENST00000505676 OR2A4O95047 310 aa15.06■□□□□ 0
TRAPPC11-204ENST00000505676 GSTT2P0CG29 244 aa15.06■□□□□ 0
TRAPPC11-204ENST00000505676 TNFSF10P50591 281 aa15.06■□□□□ 0
TRAPPC11-204ENST00000505676 ARF1P84077 181 aaKnown RBP15.06■□□□□ 0
TRAPPC11-204ENST00000505676 TMEM53Q6P2H8 277 aa15.06■□□□□ 0
TRAPPC11-204ENST00000505676 COLCA1Q6ZS62 124 aa15.06■□□□□ 0
TRAPPC11-204ENST00000505676 ZNF767PQ75MW2 155 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms