RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 CFAP54Q96N23 3096 aa3.46□□□□□ -1.86
PDLIM1P4-201ENST00000504327 PTPN13Q12923 2485 aa3.46□□□□□ -1.86
PDLIM1P4-201ENST00000504327 FRYLO94915 3013 aa3.46□□□□□ -1.86
PDLIM1P4-201ENST00000504327 NUP210Q8TEM1 1887 aaPredicted RBP3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 KIF26AQ9ULI4 1882 aaPredicted RBP3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 MYOFQ9NZM1 2061 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 A0A1B0GU03 582 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 FAM92AA1XBS5 289 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 EFCAB7A8K855 629 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 SULT2B1O00204 365 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 SLC31A1O15431 190 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CATP04040 527 aaKnown RBP3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CALB1P05937 261 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 FCGR3AP08637 254 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 OR9G9P0C7N8 305 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ZDHHC11BP0C7U3 371 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CFC1BP0CG36 223 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CFC1P0CG37 223 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 COX5BP10606 129 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ZP3P21754 424 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 KLK7P49862 253 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DVL1P1P54792 670 aaPredicted RBP3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CXCR4P61073 352 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 RPS14P62263 151 aaKnown RBP3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 UNC119Q13432 240 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 NAB1Q13506 487 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DPYSL3Q14195 570 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 POU2AF1Q16633 256 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 MOGQ16653 247 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TMEM249Q2WGJ8 235 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 PDZD11Q5EBL8 140 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TIMM23BQ5SRD1 257 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 FAM120AOSQ5T036 256 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 OGFRL1Q5TC84 451 aaPredicted RBP3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 BSPRYQ5W0U4 402 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 REP15Q6BDI9 236 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 FRMPD2BQ6IN97 320 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TRIM40Q6P9F5 258 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 Q6ZSR9 355 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 MRPL52Q86TS9 123 aaKnown RBP3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 NFE4Q86UQ8 179 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ZFAND4Q86XD8 727 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 SAMD12Q8N8I0 201 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TMEM35BQ8NCS4 154 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 FNDC8Q8TC99 324 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TFB1MQ8WVM0 346 aaKnown RBP3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 WBP1Q96G27 269 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 SMARCD1Q96GM5 515 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TMEM80Q96HE8 168 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 MS4A14Q96JA4 679 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 POM121L2Q96KW2 1035 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CALN1Q9BXU9 219 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 MRPS26Q9BYN8 205 aaKnown RBP3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 UBXN6Q9BZV1 441 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CHRNA10Q9GZZ6 450 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ISYNA1Q9NPH2 558 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 MEPEQ9NQ76 525 aaPredicted RBP3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 C8orf4Q9NR00 106 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CTPS2Q9NRF8 586 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 FGFR1OP2Q9NVK5 253 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 NLE1Q9NVX2 485 aaPredicted RBP3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 NDE1Q9NXR1 346 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 BABAM2Q9NXR7 383 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 STOML2Q9UJZ1 356 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 FAF1Q9UNN5 650 aaPredicted RBP3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 PPP1R3CQ9UQK1 317 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 PTPRZ1P23471 2315 aaPredicted RBP3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 MYO16Q9Y6X6 1858 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 FAM186AA6NE01 2351 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 SPTBN4Q9H254 2564 aa3.45□□□□□ -1.86
PDLIM1P4-201ENST00000504327 COL4A2P08572 1712 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 OTOGLQ3ZCN5 2332 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 MYO18AQ92614 2054 aaKnown RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ATG2BQ96BY7 2078 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 A0A1B0GW55 424 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 A0A1W2PQL4 384 aaPredicted RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 B4DXG7 233 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 LOC110117498-PIK3R3F6TDL0 507 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ATP8B1O43520 1251 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ENSAO43768 121 aaKnown RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 PRKNO60260 465 aaPredicted RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 IGHV2-5P01817 119 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 H2AFZP0C0S5 128 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DUX4L2P0CJ85 424 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DUX4L3P0CJ86 424 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DUX4L4P0CJ87 422 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DUX4L5P0CJ88 424 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DUX4L6P0CJ89 424 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DUX4L7P0CJ90 424 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 HSD17B1P14061 328 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 HIST1H1CP16403 213 aaKnown RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CSNK2A2P19784 350 aaPredicted RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ANOS1P23352 680 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 HTR1FP30939 366 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TIMP3P35625 211 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 PTGDSP41222 190 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CAPZBP47756 277 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 RPL34P49207 117 aaKnown RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 GNG10P50151 68 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 EFNA3P52797 238 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms