RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ZNF20P17024 532 aa17.45■□□□□ 0.38
CDC42SE2-206ENST00000503291 FGF9P31371 208 aaPredicted RBP17.45■□□□□ 0.38
CDC42SE2-206ENST00000503291 C22orf42Q6IC83 251 aa17.45■□□□□ 0.38
CDC42SE2-206ENST00000503291 FTMTQ8N4E7 242 aa17.45■□□□□ 0.38
CDC42SE2-206ENST00000503291 CENPOQ9BU64 300 aa17.45■□□□□ 0.38
CDC42SE2-206ENST00000503291 ENPP5Q9UJA9 477 aa17.45■□□□□ 0.38
CDC42SE2-206ENST00000503291 CRYBG3Q68DQ2 2970 aa17.45■□□□□ 0.38
CDC42SE2-206ENST00000503291 ZNF816-ZNF321PA0A0X1KG74 233 aa17.44■□□□□ 0.38
CDC42SE2-206ENST00000503291 DPPA5A6NC42 116 aa17.44■□□□□ 0.38
CDC42SE2-206ENST00000503291 RAF1P04049 648 aa17.44■□□□□ 0.38
CDC42SE2-206ENST00000503291 GNALP38405 381 aa17.44■□□□□ 0.38
CDC42SE2-206ENST00000503291 LSM3P62310 102 aaKnown RBP17.44■□□□□ 0.38
CDC42SE2-206ENST00000503291 ZBTB37Q5TC79 503 aa17.44■□□□□ 0.38
CDC42SE2-206ENST00000503291 ASPHD2Q6ICH7 369 aa17.44■□□□□ 0.38
CDC42SE2-206ENST00000503291 PAMR1Q6UXH9 720 aa17.44■□□□□ 0.38
CDC42SE2-206ENST00000503291 GDPGP1Q6ZNW5 385 aa17.44■□□□□ 0.38
CDC42SE2-206ENST00000503291 SLC16A12Q6ZSM3 486 aa17.44■□□□□ 0.38
CDC42SE2-206ENST00000503291 PPP1R3EQ9H7J1 279 aa17.44■□□□□ 0.38
CDC42SE2-206ENST00000503291 UCHL1P09936 223 aa17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 OR8G5Q8NG78 346 aa17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 OR5D14Q8NGL3 314 aa17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 PIGCQ92535 297 aa17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 PHYHIPQ92561 330 aa17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 FBXW5Q969U6 566 aa17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 PAPOLGQ9BWT3 736 aaKnown RBP17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 RNF167Q9H6Y7 350 aa17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 MRPL15Q9P015 296 aaKnown RBP17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 TAAR3PQ9P1P4 343 aa17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 GSTK1Q9Y2Q3 226 aa17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 ANKRD30BLA7E2S9 258 aa17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 HS3ST1O14792 307 aa17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 KRT74Q7RTS7 529 aa17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 PP6455Q8WZ26 134 aa17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 CEPT1Q9Y6K0 416 aa17.43■□□□□ 0.38
CDC42SE2-206ENST00000503291 A0A1W2PPW3 197 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 GMDSO60547 372 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 ARL6IP5O75915 188 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 GABARAPO95166 117 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 CST4P01036 141 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 CA6P23280 308 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 CALRP27797 417 aaKnown RBP17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 EVX1P49640 407 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 HSD17B12Q53GQ0 312 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 DMRTC1Q5HYR2 192 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 CLVS2Q5SYC1 327 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 TMEM42Q69YG0 159 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 MUC15Q8N387 334 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 CHST5Q9GZS9 411 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 CLEC4MQ9H2X3 399 aaPredicted RBP17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 TAS2R4Q9NYW5 299 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 ZNF850A8MQ14 1090 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 NRASP01111 189 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 SRMP19623 302 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 MMP15P51511 669 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 UBE2V2Q15819 145 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 CTF1Q16619 201 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 MOGQ16653 247 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 MST1LQ2TV78 715 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 ZNF295-AS1Q8N0V1 137 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 SLC30A2Q9BRI3 323 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 ZCCHC4Q9H5U6 513 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 MSL2Q9HCI7 577 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 TMEM100Q9NV29 134 aa17.42■□□□□ 0.38
CDC42SE2-206ENST00000503291 TRAV8-7A0A075B6U6 113 aa17.41■□□□□ 0.38
CDC42SE2-206ENST00000503291 TMBIM6P55061 237 aa17.41■□□□□ 0.38
CDC42SE2-206ENST00000503291 EFNB3Q15768 340 aa17.41■□□□□ 0.38
CDC42SE2-206ENST00000503291 Q6ZR03 302 aa17.41■□□□□ 0.38
CDC42SE2-206ENST00000503291 FBXL14Q8N1E6 418 aa17.41■□□□□ 0.38
CDC42SE2-206ENST00000503291 OR13C9Q8NGT0 318 aa17.41■□□□□ 0.38
CDC42SE2-206ENST00000503291 UBASH3BQ8TF42 649 aa17.41■□□□□ 0.38
CDC42SE2-206ENST00000503291 PIGTQ969N2 578 aa17.41■□□□□ 0.38
CDC42SE2-206ENST00000503291 GPR173Q9NS66 373 aa17.41■□□□□ 0.38
CDC42SE2-206ENST00000503291 CKLFQ9UBR5 152 aa17.41■□□□□ 0.38
CDC42SE2-206ENST00000503291 GPR160Q9UJ42 338 aa17.41■□□□□ 0.38
CDC42SE2-206ENST00000503291 PLSCR5A0PG75 271 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 B9A039 149 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 IGFBP3P17936 291 aaPredicted RBP17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 TGFBR1P36897 503 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 ALDH3B1P43353 468 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 VBP1P61758 197 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 PRDX4Q13162 271 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 NKPD1Q17RQ9 610 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 CEP78Q5JTW2 689 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 UTS2BQ765I0 119 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 KCTD7Q96MP8 289 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 RBM38Q9H0Z9 239 aaKnown RBP17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 TCF7L1Q9HCS4 588 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 MPC1Q9Y5U8 109 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 NCS1P62166 190 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 TLE4Q04727 773 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 ZNF529Q6P280 563 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 MOB3CQ70IA8 216 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 OR51A2Q8NGJ7 313 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 OR13G1Q8NGZ3 307 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 RAB2BQ8WUD1 216 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 UBTD1Q9HAC8 227 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 FOXJ3Q9UPW0 622 aa17.4■□□□□ 0.38
CDC42SE2-206ENST00000503291 IGKV1-9A0A0C4DH69 117 aa17.39■□□□□ 0.37
CDC42SE2-206ENST00000503291 SHISA3A0PJX4 238 aa17.39■□□□□ 0.37
CDC42SE2-206ENST00000503291 CCDC160A6NGH7 325 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms