RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 DUS4LO95620 317 aaKnown RBP8.66□□□□□ -1.02
CLIP1-204ENST00000501271 LIFP15018 202 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 CTSSP25774 331 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 FKBP2P26885 142 aaKnown RBP8.66□□□□□ -1.02
CLIP1-204ENST00000501271 SLC6A9P48067 706 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 BAMBIQ13145 260 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 RSPO4Q2I0M5 234 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-204ENST00000501271 C10orf128Q5T292 105 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 HSD17B13Q7Z5P4 300 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-204ENST00000501271 LRRC18Q8N456 261 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 MR1Q95460 341 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 TMEM54Q969K7 222 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 JSRP1Q96MG2 331 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-204ENST00000501271 MS4A7Q9GZW8 240 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-204ENST00000501271 SLC25A32Q9H2D1 315 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 PPA2Q9H2U2 334 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 PRO3102Q9H379 93 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 NELFAQ9H3P2 528 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 C5orf66Q9H5L9 145 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 ZNF160Q9HCG1 818 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 RASL12Q9NYN1 266 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 MBD2Q9UBB5 411 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 NXT1Q9UKK6 140 aaKnown RBP8.66□□□□□ -1.02
CLIP1-204ENST00000501271 HS3ST3B1Q9Y662 390 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 A0A087WZY1 265 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 D6RAR5 112 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 ZIC3O60481 467 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 CFIP05156 583 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 CCL4P13236 92 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 NPY4RP50391 375 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 IL11RAQ14626 422 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 KISS1Q15726 138 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 RSPO1Q2MKA7 263 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-204ENST00000501271 SMUG1Q53HV7 270 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 VAX1Q5SQQ9 334 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 OPN5Q6U736 354 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 ACOT7LQ6ZUV0 252 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 TMEM123Q8N131 208 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 STPG2Q8N412 459 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 PXT1Q8NFP0 134 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 OR56B1Q8NGI3 324 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 OR10K1Q8NGX5 313 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 TERB2Q8NHR7 220 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 TMEM230Q96A57 120 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 ANGPTL4Q9BY76 406 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 ZNF700Q9H0M5 742 aa8.66□□□□□ -1.02
CLIP1-204ENST00000501271 TMEM265A0A087WTH1 108 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 KRBOX1C9JBD0 128 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 DBHP09172 617 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 PRF1P14222 555 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 FAHP16930 419 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 ECH1Q13011 328 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 UBE2V2Q15819 145 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 PXDC1Q5TGL8 231 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 FOXL2NBQ6ZUU3 175 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 EIF4E3Q8N5X7 224 aaKnown RBP8.65□□□□□ -1.02
CLIP1-204ENST00000501271 GJC3Q8NFK1 279 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 OR9K2Q8NGE7 335 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 MAFAQ8NHW3 353 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-204ENST00000501271 MICU1Q9BPX6 476 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 OCSTAMPQ9BR26 566 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 ZNF471Q9BX82 626 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-204ENST00000501271 SHARPINQ9H0F6 387 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 OR10A2Q9H208 303 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 BARX1Q9HBU1 254 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-204ENST00000501271 SH2D2AQ9NP31 389 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 PRR13Q9NZ81 148 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 C5orf51A6NDU8 294 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 FOXI3A8MTJ6 420 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-204ENST00000501271 PATE3B3GLJ2 98 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 NPIPA2E9PIF3 369 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 NPIPA3F8WFD2 350 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 STMND1H3BQB6 276 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 TNFSF11O14788 317 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 DHRS3O75911 302 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 CRHP06850 196 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 NR2C1P13056 603 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 PI3P19957 117 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 SERPINF1P36955 418 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 PTGFRP43088 359 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 SSR4P51571 173 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 ZNF133P52736 654 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-204ENST00000501271 DSCR4P56555 118 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-204ENST00000501271 TAS2R31P59538 309 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 ARFRP1Q13795 201 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 EXT1Q16394 746 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 PNLIPRP3Q17RR3 467 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 ZNF468Q5VIY5 522 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-204ENST00000501271 FAM89BQ8N5H3 189 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 ARRDC1Q8N5I2 433 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 OR51T1Q8NGJ9 327 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 THAP6Q8TBB0 222 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 PAQR8Q8TEZ7 354 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 MAFIPQ8WZ33 124 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 NTNG2Q96CW9 530 aa8.65□□□□□ -1.02
CLIP1-204ENST00000501271 ZNF837Q96EG3 531 aaPredicted RBP8.65□□□□□ -1.02
CLIP1-204ENST00000501271 MRPS24Q96EL2 167 aaKnown RBP8.65□□□□□ -1.02
CLIP1-204ENST00000501271 URM1Q9BTM9 101 aaKnown RBP8.65□□□□□ -1.02
CLIP1-204ENST00000501271 RBM24Q9BX46 236 aaKnown RBP8.65□□□□□ -1.02
CLIP1-204ENST00000501271 DKKL1Q9UK85 242 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms