RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 FAM162AQ96A26 154 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 C7orf34Q96L11 122 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 DHRS1Q96LJ7 313 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 CADM1Q9BY67 442 aaKnown RBP13.15□□□□□ -0.3
MUC1-220ENST00000498431 PPP1R3EQ9H7J1 279 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 FBLN5Q9UBX5 448 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 MAGEL2Q9UJ55 1249 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 CAB39Q9Y376 341 aaPredicted RBP13.15□□□□□ -0.3
MUC1-220ENST00000498431 ANKRD61A6NGH8 418 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 TVP23AA6NH52 213 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 TFF1P04155 84 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 SLC6A6P31641 620 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 GABRA5P31644 462 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 MSX2P35548 267 aaPredicted RBP13.14□□□□□ -0.31
MUC1-220ENST00000498431 PRKXP51817 358 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 IKZF1Q13422 519 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 HERPUD1Q15011 391 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 ZSCAN26Q16670 478 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 MICBQ29980 383 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 GLYATQ6IB77 296 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 ASRGL1Q7L266 308 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 GALNT4Q8N4A0 578 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 C17orf50Q8WW18 174 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 CLPTM1LQ96KA5 538 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 IFT27Q9BW83 186 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 MUC13Q9H3R2 512 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 TOR3AQ9H497 397 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 C14orf119Q9NWQ9 140 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 FAM32AQ9Y421 112 aaKnown RBP13.14□□□□□ -0.31
MUC1-220ENST00000498431 N6AMT1Q9Y5N5 214 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 NOTCH3Q9UM47 2321 aa13.14□□□□□ -0.31
MUC1-220ENST00000498431 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.13□□□□□ -0.31
MUC1-220ENST00000498431 MEIOCA2RUB1 952 aa13.13□□□□□ -0.31
MUC1-220ENST00000498431 GPR37O15354 613 aa13.13□□□□□ -0.31
MUC1-220ENST00000498431 MUC1P15941 1255 aaPredicted RBP13.13□□□□□ -0.31
MUC1-220ENST00000498431 EEF1B2P24534 225 aaKnown RBP13.13□□□□□ -0.31
MUC1-220ENST00000498431 EFNB2P52799 333 aa13.13□□□□□ -0.31
MUC1-220ENST00000498431 GUCA2AQ02747 115 aa13.13□□□□□ -0.31
MUC1-220ENST00000498431 TRIM25Q14258 630 aaKnown RBP13.13□□□□□ -0.31
MUC1-220ENST00000498431 SLC35F1Q5T1Q4 408 aa13.13□□□□□ -0.31
MUC1-220ENST00000498431 DRAM2Q6UX65 266 aa13.13□□□□□ -0.31
MUC1-220ENST00000498431 WDR82Q6UXN9 313 aa13.13□□□□□ -0.31
MUC1-220ENST00000498431 Q6ZTK2 550 aa13.13□□□□□ -0.31
MUC1-220ENST00000498431 CMTM4Q8IZR5 234 aa13.13□□□□□ -0.31
MUC1-220ENST00000498431 OR5T2Q8NGG2 359 aa13.13□□□□□ -0.31
MUC1-220ENST00000498431 DCTN5Q9BTE1 182 aa13.13□□□□□ -0.31
MUC1-220ENST00000498431 GORASP2Q9H8Y8 452 aa13.13□□□□□ -0.31
MUC1-220ENST00000498431 RNPEPL1Q9HAU8 725 aa13.13□□□□□ -0.31
MUC1-220ENST00000498431 KCNG2Q9UJ96 466 aa13.13□□□□□ -0.31
MUC1-220ENST00000498431 H3BUX3 64 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 ARPC2O15144 300 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 PAHP00439 452 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 ZNF823P16415 610 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 NOS3P29474 1203 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 TGM4P49221 684 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.12□□□□□ -0.31
MUC1-220ENST00000498431 SLC36A1Q7Z2H8 476 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 DPY19L4Q7Z388 723 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 DCXRQ7Z4W1 244 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 CYB561A3Q8NBI2 242 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 OR1M1Q8NGA1 313 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 OR51L1Q8NGJ5 315 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 OR8S1Q8NH09 359 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 OR5R1Q8NH85 324 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 CFHR4Q92496 578 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 H1FXQ92522 213 aaKnown RBP13.12□□□□□ -0.31
MUC1-220ENST00000498431 CCDC124Q96CT7 223 aaKnown RBP13.12□□□□□ -0.31
MUC1-220ENST00000498431 ITPKCQ96DU7 683 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 ASB9Q96DX5 294 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 COPS4Q9BT78 406 aa13.12□□□□□ -0.31
MUC1-220ENST00000498431 KRCC1Q9NPI7 259 aaPredicted RBP13.12□□□□□ -0.31
MUC1-220ENST00000498431 MEGF11A6BM72 1044 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 NDUFB3O43676 98 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 PAX6P26367 422 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 GMFBP60983 142 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 MZT1Q08AG7 82 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 LY6EQ16553 131 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 OXLD1Q5BKU9 147 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 STUMQ69YW2 141 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 DHFR2Q86XF0 187 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 ZDHHC21Q8IVQ6 265 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 LYG1Q8N1E2 194 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 KLHDC1Q8N7A1 406 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 PROKR2Q8NFJ6 384 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 C8orf46Q8TAG6 207 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 MRAPQ8TCY5 172 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 RORBQ92753 470 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 SPSB4Q96A44 273 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 NSMCE2Q96MF7 247 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 DDOQ99489 341 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 WDR13Q9H1Z4 485 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 SNTG1Q9NSN8 517 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 ACTR3BQ9P1U1 418 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 COMMD3-BMI1R4GMX3 469 aa13.11□□□□□ -0.31
MUC1-220ENST00000498431 ANKRD30BLA7E2S9 258 aa13.1□□□□□ -0.31
MUC1-220ENST00000498431 CDIPTO14735 213 aa13.1□□□□□ -0.31
MUC1-220ENST00000498431 GRK5P34947 590 aa13.1□□□□□ -0.31
MUC1-220ENST00000498431 UBE2E1P51965 193 aa13.1□□□□□ -0.31
MUC1-220ENST00000498431 FAM3AP98173 230 aa13.1□□□□□ -0.31
MUC1-220ENST00000498431 MS4A2Q01362 244 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms