RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 OR8J3Q8NGG0 315 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 TSPEARQ8WU66 669 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 DYDC1Q8WWB3 177 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 NMNAT3Q96T66 252 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 DDOQ99489 341 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 PRSS22Q9GZN4 317 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 MEGF9Q9H1U4 602 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 FN3KQ9H479 309 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 OPA3Q9H6K4 179 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 KRCC1Q9NPI7 259 aaPredicted RBP9.46□□□□□ -0.9
CDK9-205ENST00000498339 PNRC2Q9NPJ4 139 aaKnown RBP9.46□□□□□ -0.9
CDK9-205ENST00000498339 ABCB10Q9NRK6 738 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 SIGLEC7Q9Y286 467 aa9.46□□□□□ -0.9
CDK9-205ENST00000498339 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.45□□□□□ -0.9
CDK9-205ENST00000498339 CDIPTO14735 213 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 TIPRLO75663 272 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 GLCEO94923 617 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 CLIC3O95833 236 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 ANOS1P23352 680 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 COX7A1P24310 79 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 NOS3P29474 1203 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 RPS27P42677 84 aaKnown RBP9.45□□□□□ -0.9
CDK9-205ENST00000498339 GABRA2P47869 451 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 TGM4P49221 684 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 CAPZA1P52907 286 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 KRTAP10-11P60412 298 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 CNN3Q15417 329 aaKnown RBP9.45□□□□□ -0.9
CDK9-205ENST00000498339 DGUOKQ16854 277 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 TIGD6Q17RP2 521 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 IFI44LQ53G44 452 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 DRAM2Q6UX65 266 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 FKBP9P1Q75LS8 142 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 C11orf53Q8IXP5 236 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 TMEM185AQ8NFB2 350 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 OR4C15Q8NGM1 316 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 FANK1Q8TC84 345 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 MED30Q96HR3 178 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 RCC1LQ96I51 464 aaKnown RBP9.45□□□□□ -0.9
CDK9-205ENST00000498339 MAP6Q96JE9 813 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 GAFA1Q96PS6 74 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 PAPOLGQ9BWT3 736 aaKnown RBP9.45□□□□□ -0.9
CDK9-205ENST00000498339 CDCA4Q9BXL8 241 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 PARD6BQ9BYG5 372 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 HAO2Q9NYQ3 351 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 CYB5R1Q9UHQ9 305 aa9.45□□□□□ -0.9
CDK9-205ENST00000498339 UNC119BA6NIH7 251 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 MRASO14807 208 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 XRCC2O43543 280 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 DUS4LO95620 317 aaKnown RBP9.44□□□□□ -0.9
CDK9-205ENST00000498339 TXNDC12O95881 172 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 ALDOBP05062 364 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 AMY2BP19961 511 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 DDOSTP39656 456 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 PRKXP51817 358 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 DCTN2Q13561 401 aaKnown RBP9.44□□□□□ -0.9
CDK9-205ENST00000498339 GFOD2Q3B7J2 385 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 TMEM95Q3KNT9 176 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 HCP5Q6MZN7 132 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 SMARCD3Q6STE5 483 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 KCTD8Q6ZWB6 473 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 MKXQ8IYA7 352 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 WFDC9Q8NEX5 89 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 SDR9C7Q8NEX9 313 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 OR4K13Q8NH42 304 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 RPS4Y2Q8TD47 263 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 DNTTIP1Q9H147 329 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 WDR13Q9H1Z4 485 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 TCF19Q9Y242 345 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 PCDHGB5Q9Y5G0 923 aa9.44□□□□□ -0.9
CDK9-205ENST00000498339 ANXA2P2A6NMY6 339 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 FXYD1O00168 92 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 SIGLEC5O15389 551 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 AKR7A2O43488 359 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 PTP4A3O75365 173 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 ANXA2P07355 339 aaKnown RBP9.43□□□□□ -0.9
CDK9-205ENST00000498339 HIST1H1CP16403 213 aaKnown RBP9.43□□□□□ -0.9
CDK9-205ENST00000498339 SLC6A6P31641 620 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 RAB13P51153 203 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 CAV3P56539 151 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 KLHL22Q53GT1 634 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 ATPAF1Q5TC12 328 aaPredicted RBP9.43□□□□□ -0.9
CDK9-205ENST00000498339 AGBL2Q5U5Z8 902 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 ZNF788Q6ZQV5 615 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 CCDC121Q6ZUS5 278 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 SLC16A9Q7RTY1 509 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 Q8N2B8 174 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 AJUBAQ96IF1 538 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 HSH2DQ96JZ2 352 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 RAB3IPQ96QF0 476 aaPredicted RBP9.43□□□□□ -0.9
CDK9-205ENST00000498339 MICU1Q9BPX6 476 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 IFT27Q9BW83 186 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 RTL8AQ9BWD3 113 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 MUC13Q9H3R2 512 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 ANKRD19PQ9H560 264 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 HEXA-AS1Q9H8Q6 139 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 CENPMQ9NSP4 180 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 KCNG2Q9UJ96 466 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 PITPNC1Q9UKF7 332 aa9.43□□□□□ -0.9
CDK9-205ENST00000498339 A0A1W2PPH5 198 aa9.42□□□□□ -0.9
CDK9-205ENST00000498339 TCRBV4S1A1TA0A5B7 111 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms