RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 ZNF773Q6PK81 442 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 SPARTQ8N0X7 666 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 FTMTQ8N4E7 242 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 ZFP41Q8N8Y5 198 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 CCDC54Q8NEL0 328 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 SEMA6DQ8NFY4 1073 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 OR13G1Q8NGZ3 307 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 NINJ1Q92982 152 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 TRMT61AQ96FX7 289 aaKnown RBP17.08■□□□□ 0.32
CTSD-206ENST00000497544 NR1H4Q96RI1 486 aaPredicted RBP17.08■□□□□ 0.32
CTSD-206ENST00000497544 RAB1BQ9H0U4 201 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 ACOT13Q9NPJ3 140 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 HHLA2Q9UM44 414 aa17.08■□□□□ 0.32
CTSD-206ENST00000497544 LSM2Q9Y333 95 aaKnown RBP17.08■□□□□ 0.32
CTSD-206ENST00000497544 SIRT4Q9Y6E7 314 aaPredicted RBP17.08■□□□□ 0.32
CTSD-206ENST00000497544 PNMA8CA0A1B0GUJ8 204 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 TRIM64A6NGJ6 449 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 C17orf100A8MU93 164 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 OVOL3O00110 214 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 SPRY3O43610 288 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 ZFPL1O95159 310 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 ACHEP22303 614 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 CCL1P22362 96 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 BDH1Q02338 343 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 ZCCHC24Q8N2G6 241 aaKnown RBP17.07■□□□□ 0.32
CTSD-206ENST00000497544 PLPP7Q8NBV4 271 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 OR14K1Q8NGZ2 314 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 IGFBPL1Q8WX77 278 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 PDCD1LG2Q9BQ51 273 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 SLC22A4Q9H015 551 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 ZDHHC8Q9ULC8 765 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 V9GYS6 101 aa17.07■□□□□ 0.32
CTSD-206ENST00000497544 LOC107986453A0A1B0GWG9 222 aa17.06■□□□□ 0.32
CTSD-206ENST00000497544 LILRA1O75019 489 aa17.06■□□□□ 0.32
CTSD-206ENST00000497544 CELP19835 753 aa17.06■□□□□ 0.32
CTSD-206ENST00000497544 ACKR3P25106 362 aa17.06■□□□□ 0.32
CTSD-206ENST00000497544 TNK1Q13470 666 aa17.06■□□□□ 0.32
CTSD-206ENST00000497544 DMKNQ6E0U4 476 aaPredicted RBP17.06■□□□□ 0.32
CTSD-206ENST00000497544 PIGCQ92535 297 aa17.06■□□□□ 0.32
CTSD-206ENST00000497544 GTF3AQ92664 365 aaKnown RBP17.06■□□□□ 0.32
CTSD-206ENST00000497544 SMIM19Q96E16 107 aa17.06■□□□□ 0.32
CTSD-206ENST00000497544 DIRC2Q96SL1 478 aa17.06■□□□□ 0.32
CTSD-206ENST00000497544 SLC30A2Q9BRI3 323 aa17.06■□□□□ 0.32
CTSD-206ENST00000497544 TPK1Q9H3S4 243 aa17.06■□□□□ 0.32
CTSD-206ENST00000497544 ZNF696Q9H7X3 374 aa17.06■□□□□ 0.32
CTSD-206ENST00000497544 ISYNA1Q9NPH2 558 aa17.06■□□□□ 0.32
CTSD-206ENST00000497544 MRPL15Q9P015 296 aaKnown RBP17.06■□□□□ 0.32
CTSD-206ENST00000497544 PIGLQ9Y2B2 252 aa17.06■□□□□ 0.32
CTSD-206ENST00000497544 NOP16Q9Y3C1 178 aaKnown RBP17.06■□□□□ 0.32
CTSD-206ENST00000497544 ARID1AO14497 2285 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 A0A087WXM4 84 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 H7C417 338 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 TPD52L2O43399 206 aaKnown RBP17.05■□□□□ 0.32
CTSD-206ENST00000497544 PLPP2O43688 288 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 CA6P23280 308 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 TNFSF4P23510 183 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 GNALP38405 381 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 OR8G1Q15617 311 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 CLEC9AQ6UXN8 241 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 Q6ZR03 302 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 ZNF367Q7RTV3 350 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 TSPAN14Q8NG11 270 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 OR2Z1Q8NG97 314 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 RPS4Y2Q8TD47 263 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 GHSRQ92847 366 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 MGLLQ99685 303 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 PLEKHA1Q9HB21 404 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 BEX4Q9NWD9 120 aaPredicted RBP17.05■□□□□ 0.32
CTSD-206ENST00000497544 ENPP5Q9UJA9 477 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 ZNF281Q9Y2X9 895 aa17.05■□□□□ 0.32
CTSD-206ENST00000497544 ZNF816-ZNF321PA0A0X1KG74 233 aa17.04■□□□□ 0.32
CTSD-206ENST00000497544 ZSCAN5BA6NJL1 495 aa17.04■□□□□ 0.32
CTSD-206ENST00000497544 DHRS7CA6NNS2 312 aa17.04■□□□□ 0.32
CTSD-206ENST00000497544 GMDSO60547 372 aa17.04■□□□□ 0.32
CTSD-206ENST00000497544 IGHV1-46P01743 117 aa17.04■□□□□ 0.32
CTSD-206ENST00000497544 MLLT11Q13015 90 aaPredicted RBP17.04■□□□□ 0.32
CTSD-206ENST00000497544 TSTQ16762 297 aaKnown RBP17.04■□□□□ 0.32
CTSD-206ENST00000497544 PCGF3Q3KNV8 242 aa17.04■□□□□ 0.32
CTSD-206ENST00000497544 ZBTB37Q5TC79 503 aa17.04■□□□□ 0.32
CTSD-206ENST00000497544 Q6ZSR3 168 aa17.04■□□□□ 0.32
CTSD-206ENST00000497544 OR13C3Q8NGS6 347 aa17.04■□□□□ 0.32
CTSD-206ENST00000497544 NEU4Q8WWR8 484 aaPredicted RBP17.04■□□□□ 0.32
CTSD-206ENST00000497544 FCGR1BQ92637 280 aa17.04■□□□□ 0.32
CTSD-206ENST00000497544 UFD1Q92890 307 aa17.04■□□□□ 0.32
CTSD-206ENST00000497544 PAPOLGQ9BWT3 736 aaKnown RBP17.04■□□□□ 0.32
CTSD-206ENST00000497544 DECR2Q9NUI1 292 aa17.04■□□□□ 0.32
CTSD-206ENST00000497544 RHBDD3Q9Y3P4 386 aa17.04■□□□□ 0.32
CTSD-206ENST00000497544 MXRA5Q9NR99 2828 aa17.04■□□□□ 0.32
CTSD-206ENST00000497544 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.03■□□□□ 0.32
CTSD-206ENST00000497544 CST4P01036 141 aa17.03■□□□□ 0.32
CTSD-206ENST00000497544 HLA-DPB1P04440 258 aa17.03■□□□□ 0.32
CTSD-206ENST00000497544 CD1AP06126 327 aa17.03■□□□□ 0.32
CTSD-206ENST00000497544 FAHP16930 419 aa17.03■□□□□ 0.32
CTSD-206ENST00000497544 PCMT1P22061 227 aa17.03■□□□□ 0.32
CTSD-206ENST00000497544 TNFAIP6P98066 277 aaPredicted RBP17.03■□□□□ 0.32
CTSD-206ENST00000497544 GPR50Q13585 617 aa17.03■□□□□ 0.32
CTSD-206ENST00000497544 DOC2BQ14184 412 aa17.03■□□□□ 0.32
CTSD-206ENST00000497544 DEFB113Q30KQ7 82 aa17.03■□□□□ 0.32
CTSD-206ENST00000497544 OR10AC1Q8NH08 325 aa17.03■□□□□ 0.32
CTSD-206ENST00000497544 OR8S1Q8NH09 359 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms