RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 OR1P1Q8NH06 330 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 IFI44Q8TCB0 444 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 NUDT9Q9BW91 350 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 GSX1Q9H4S2 264 aaPredicted RBP8.08□□□□□ -1.12
HPS4-217ENST00000496385 CHST11Q9NPF2 352 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 IL17BQ9UHF5 180 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 RAB22AQ9UL26 194 aa8.08□□□□□ -1.12
HPS4-217ENST00000496385 CACNA1IQ9P0X4 2223 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 A0A0B4J2E0 115 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 A0A1B0GX12 115 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 RBFOX3A6NFN3 312 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 ZNF705GA8MUZ8 300 aaPredicted RBP8.07□□□□□ -1.12
HPS4-217ENST00000496385 K7EQS6 105 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 ZNF264O43296 627 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 HSPB1P04792 205 aaKnown RBP8.07□□□□□ -1.12
HPS4-217ENST00000496385 CSN2P05814 226 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 CST2P09228 141 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 CISD3P0C7P0 127 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 ZNF708P17019 499 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 TSFMP43897 325 aaKnown RBP8.07□□□□□ -1.12
HPS4-217ENST00000496385 PDLIM4P50479 330 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 PAX5Q02548 391 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 TMEM176BQ3YBM2 270 aaPredicted RBP8.07□□□□□ -1.12
HPS4-217ENST00000496385 ARSJQ5FYB0 599 aaPredicted RBP8.07□□□□□ -1.12
HPS4-217ENST00000496385 VAX1Q5SQQ9 334 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 ULK3Q6PHR2 472 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 RABEPKQ7Z6M1 372 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 OR4S1Q8NGB4 309 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 OR51F2Q8NH61 342 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 NPRL2Q8WTW4 380 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 SLC25A43Q8WUT9 341 aaPredicted RBP8.07□□□□□ -1.12
HPS4-217ENST00000496385 SCAMP4Q969E2 229 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 TMEM18Q96B42 140 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 C4orf45Q96LM5 186 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 SDF2Q99470 211 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 PRRX2Q99811 253 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 SYT3Q9BQG1 590 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 NIPSNAP3BQ9BS92 247 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 SIT1Q9Y3P8 196 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 YLPM1P49750 1951 aaKnown RBP8.07□□□□□ -1.12
HPS4-217ENST00000496385 ZNF727A8MUV8 499 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 PRR32B1ATL7 298 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 CLDN34H7C241 214 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 BNIP3LO60238 219 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 TSPAN2O60636 221 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 ZNF217O75362 1048 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 DEDDO75618 318 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 GUSBP08236 651 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 APLNRP35414 380 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 SPOCK1Q08629 439 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 TMEM196Q5HYL7 178 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 C1orf100Q5SVJ3 147 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 MRPL2Q5T653 305 aaKnown RBP8.07□□□□□ -1.12
HPS4-217ENST00000496385 GPR157Q5UAW9 335 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 DMRTA1Q5VZB9 504 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 ZNF343Q6P1L6 599 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 ZNF429Q86V71 674 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 FOXRED2Q8IWF2 684 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 MARCH1Q8TCQ1 289 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 TSEN15Q8WW01 171 aaKnown RBP8.07□□□□□ -1.12
HPS4-217ENST00000496385 GPX7Q96SL4 187 aaPredicted RBP8.07□□□□□ -1.12
HPS4-217ENST00000496385 HIPK2Q9H2X6 1198 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 KIAA1456Q9P272 454 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 TUBD1Q9UJT1 453 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 ZNF780BQ9Y6R6 833 aa8.07□□□□□ -1.12
HPS4-217ENST00000496385 A0A1W2PN81 502 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 OPN1MWP04001 364 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 THEGLP0DJG4 465 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 OPN1MW2P0DN77 364 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 OPN1MW3P0DN78 364 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 FPR2P25090 351 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 HRH1P35367 487 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 CHRNA7P36544 502 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 GABRA4P48169 554 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 IDH3GP51553 393 aaPredicted RBP8.06□□□□□ -1.12
HPS4-217ENST00000496385 RBX1P62877 108 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 TMEM241Q24JQ0 296 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 CHRFAM7AQ494W8 412 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 POMZP3Q6PJE2 187 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 GDPD4Q6W3E5 623 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 TMEM105Q8N8V8 129 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 NOXO1Q8NFA2 376 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 SLC24A4Q8NFF2 622 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 ZNRF4Q8WWF5 429 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 OR10C1Q96KK4 312 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 LINC00615Q96LM1 132 aaPredicted RBP8.06□□□□□ -1.12
HPS4-217ENST00000496385 ZNF681Q96N22 645 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 LMF1Q96S06 567 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 NMNAT3Q96T66 252 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 TRIM2Q9C040 744 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 SRD5A3Q9H8P0 318 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 IL36AQ9UHA7 158 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 FOXD3Q9UJU5 478 aaPredicted RBP8.06□□□□□ -1.12
HPS4-217ENST00000496385 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.06□□□□□ -1.12
HPS4-217ENST00000496385 SDK1Q7Z5N4 2213 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 LAMA1P25391 3075 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 A8MXE2 369 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 PRH1P02810 166 aa8.06□□□□□ -1.12
HPS4-217ENST00000496385 SRP19P09132 144 aaKnown RBP8.06□□□□□ -1.12
HPS4-217ENST00000496385 SLC35G4P0C7Q5 338 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms