RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 A0A1B0GWJ7 208 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 ANXA2P2A6NMY6 339 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 IFNA2P01563 188 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 MSMBP08118 114 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 HOXB4P17483 251 aaPredicted RBP13.82□□□□□ -0.2
SF3A1-209ENST00000496189 DCKP27707 260 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 MDH2P40926 338 aaKnown RBP13.82□□□□□ -0.2
SF3A1-209ENST00000496189 GATA4P43694 442 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 GSK3AP49840 483 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 DVL1P1P54792 670 aaPredicted RBP13.82□□□□□ -0.2
SF3A1-209ENST00000496189 CSNK2BP67870 215 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 FAM3AP98173 230 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 SMN1Q16637 294 aaKnown RBP13.82□□□□□ -0.2
SF3A1-209ENST00000496189 ZNF181Q2M3W8 571 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 TMEM155Q4W5P6 130 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 BCL2L15Q5TBC7 163 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 LIPNQ5VXI9 398 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 SSX6Q7RTT6 188 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 PLPP7Q8NBV4 271 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 POM121Q96HA1 1249 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 PAPOLGQ9BWT3 736 aaKnown RBP13.82□□□□□ -0.2
SF3A1-209ENST00000496189 PBOV1Q9GZY1 135 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 FAM206AQ9NX38 181 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 GNG8Q9UK08 70 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 TANC2Q9HCD6 1990 aa13.82□□□□□ -0.2
SF3A1-209ENST00000496189 NIPBLQ6KC79 2804 aaeCLIP13.81□□□□□ -0.2
SF3A1-209ENST00000496189 IGHV3-64DA0A0J9YX35 117 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 A0A0U1RQV5 110 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 hCG_38984A0A1B0GV85 526 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 EFCAB10A6NFE3 127 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 A6NLC8 198 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 PRR32B1ATL7 298 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 TMEM178BH3BS89 294 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 MTRF1O75570 445 aaKnown RBP13.81□□□□□ -0.2
SF3A1-209ENST00000496189 RPP14O95059 124 aaKnown RBP13.81□□□□□ -0.2
SF3A1-209ENST00000496189 IGHV2-5P01817 119 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 IGHA1P01876 353 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 MYL12AP19105 171 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 MAP2K3P46734 347 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 LMO4P61968 165 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 ZNF85Q03923 595 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 GALEQ14376 348 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 CDONQ4KMG0 1287 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 SPRNQ5BIV9 151 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 OR8B12Q8NGG6 310 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 OR52I1Q8NGK6 324 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 ZNF420Q8TAQ5 688 aaPredicted RBP13.81□□□□□ -0.2
SF3A1-209ENST00000496189 C1orf159Q96HA4 380 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 HIST1H2AAQ96QV6 131 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 SIGLEC11Q96RL6 698 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 LPAR2Q9HBW0 351 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 FGF20Q9NP95 211 aaPredicted RBP13.81□□□□□ -0.2
SF3A1-209ENST00000496189 UFSP2Q9NUQ7 469 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 CHCHD3Q9NX63 227 aaKnown RBP13.81□□□□□ -0.2
SF3A1-209ENST00000496189 NUFIP1Q9UHK0 495 aaKnown RBP13.81□□□□□ -0.2
SF3A1-209ENST00000496189 OR52A1Q9UKL2 312 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 MPC1Q9Y5U8 109 aa13.81□□□□□ -0.2
SF3A1-209ENST00000496189 DYSFO75923 2080 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 TRAV20A0A0B4J274 112 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 WNT9BO14905 357 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 MAGEB4O15481 346 aaPredicted RBP13.8□□□□□ -0.2
SF3A1-209ENST00000496189 FAM20BO75063 409 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 IGHV2-70P01814 119 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 ATP6V1B1P15313 513 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 MRPL28Q13084 256 aaKnown RBP13.8□□□□□ -0.2
SF3A1-209ENST00000496189 MAB21L1Q13394 359 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 OR8B8Q15620 311 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 KCNJ8Q15842 424 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 TP53I3Q53FA7 332 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 ZNF684Q5T5D7 378 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 LHFPL3Q86UP9 236 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 TEX29Q8N6K0 151 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 HAVCR2Q8TDQ0 301 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 FBLIM1Q8WUP2 373 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 TMEM186Q96B77 213 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 MICU1Q9BPX6 476 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 SOX7Q9BT81 388 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 ALG8Q9BVK2 526 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 RTL8AQ9BWD3 113 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 RASSF4Q9H2L5 321 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 TRIM36Q9NQ86 728 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 PLCXD1Q9NUJ7 323 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 HIF1ANQ9NWT6 349 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 ERVK13-1Q9NX77 482 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 ZNF319Q9P2F9 582 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 RNF7Q9UBF6 113 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 RAB26Q9ULW5 256 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 MYRFQ9Y2G1 1151 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 ZFHX3Q15911 3703 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 NF1P21359 2839 aa13.8□□□□□ -0.2
SF3A1-209ENST00000496189 PPIAL4EA0A075B759 164 aa13.79□□□□□ -0.2
SF3A1-209ENST00000496189 hCG_1807616A0A1W2PRN6 198 aa13.79□□□□□ -0.2
SF3A1-209ENST00000496189 C5orf63A6NC05 138 aa13.79□□□□□ -0.2
SF3A1-209ENST00000496189 FAM157AC9JC47 383 aa13.79□□□□□ -0.2
SF3A1-209ENST00000496189 PPIAL4DF5H284 164 aa13.79□□□□□ -0.2
SF3A1-209ENST00000496189 J3QLW9 94 aa13.79□□□□□ -0.2
SF3A1-209ENST00000496189 GRPP07492 148 aa13.79□□□□□ -0.2
SF3A1-209ENST00000496189 PPIAL4FP0DN26 164 aa13.79□□□□□ -0.2
SF3A1-209ENST00000496189 ZNF19P17023 458 aa13.79□□□□□ -0.2
SF3A1-209ENST00000496189 MYF6P23409 242 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms