RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 HIST2H3AQ71DI3 136 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 UTS2BQ765I0 119 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 ZNF100Q8IYN0 542 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 FTMTQ8N4E7 242 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 TMEM251Q8N6I4 163 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 TMEM229BQ8NBD8 167 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 CHST4Q8NCG5 386 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 MDS2Q8NDY4 140 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 SEMA6DQ8NFY4 1073 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 OR1F12Q8NHA8 337 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 GRPEL2Q8TAA5 225 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 CAPSLQ8WWF8 208 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 NABP1Q96AH0 204 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 SPSB1Q96BD6 273 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 APH1AQ96BI3 265 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 ADAT3Q96EY9 351 aaPredicted RBP6.08□□□□□ -1.44
USP39-219ENST00000496047 SCMH1Q96GD3 660 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 ZNF486Q96H40 463 aaPredicted RBP6.08□□□□□ -1.44
USP39-219ENST00000496047 HYLS1Q96M11 299 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 SIGLEC12Q96PQ1 595 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 GINS4Q9BRT9 223 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 TMEM59Q9BXS4 323 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 CHST5Q9GZS9 411 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 OR51J1Q9H342 316 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 OPA3Q9H6K4 179 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 GPR35Q9HC97 309 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 GP6Q9HCN6 339 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 ACKR4Q9NPB9 350 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 PNRC2Q9NPJ4 139 aaKnown RBP6.08□□□□□ -1.44
USP39-219ENST00000496047 FBLN5Q9UBX5 448 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 IL17BQ9UHF5 180 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 SLC7A11Q9UPY5 501 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 V9GYS6 101 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 AHCTF1Q8WYP5 2266 aa6.08□□□□□ -1.44
USP39-219ENST00000496047 GTF3C1Q12789 2109 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 TRGV5A0A0B4J1U4 118 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 PINLYPA6NC86 204 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 ZNF736B4DX44 427 aaPredicted RBP6.07□□□□□ -1.44
USP39-219ENST00000496047 ARPC1BO15143 372 aaKnown RBP6.07□□□□□ -1.44
USP39-219ENST00000496047 KDM4BO94953 1096 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 NDUFB6O95139 128 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 RAB3DO95716 219 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 TGM6O95932 706 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 CSTBP04080 98 aaKnown RBP6.07□□□□□ -1.44
USP39-219ENST00000496047 LCATP04180 440 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 IFNA6P05013 189 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 IL5P05113 134 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 GSTP1P09211 210 aaKnown RBP6.07□□□□□ -1.44
USP39-219ENST00000496047 COX5BP10606 129 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 CD37P11049 281 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 SLC2A1P11166 492 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 B4GALT1P15291 398 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 ZNF32P17041 273 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 CPT2P23786 658 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 OTX1P32242 354 aaPredicted RBP6.07□□□□□ -1.44
USP39-219ENST00000496047 BTCP35070 178 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 ARR3P36575 388 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 MALLQ13021 153 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 SF3B4Q15427 424 aaKnown RBP eCLIP6.07□□□□□ -1.44
USP39-219ENST00000496047 PNLIPRP3Q17RR3 467 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 RNASE10Q5GAN6 216 aaKnown RBP6.07□□□□□ -1.44
USP39-219ENST00000496047 STEAP1BQ6NZ63 245 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 Q6ZTK2 550 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 LHFPL2Q6ZUX7 228 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 GLCCI1Q86VQ1 547 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 TMEM17Q86X19 198 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 ANGPTL5Q86XS5 388 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 DTX1Q86Y01 620 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 ZIC4Q8N9L1 334 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 ZFP62Q8NB50 900 aaPredicted RBP6.07□□□□□ -1.44
USP39-219ENST00000496047 ACBD4Q8NC06 268 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 OR52N4Q8NGI2 321 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 OR51A2Q8NGJ7 313 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 OR14K1Q8NGZ2 314 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 ABHD3Q8WU67 409 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 ASB13Q8WXK3 278 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 HAS2Q92819 552 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 PPP1R14AQ96A00 147 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 SLC25A28Q96A46 364 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 BORCS8Q96FH0 119 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 REEP6Q96HR9 211 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 ST6GAL2Q96JF0 529 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 PRRT1Q99946 306 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 SLC25A21Q9BQT8 299 aaPredicted RBP6.07□□□□□ -1.44
USP39-219ENST00000496047 SLC6A15Q9H2J7 730 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 SLA2Q9H6Q3 261 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 CNTD2Q9H8S5 307 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 NOX3Q9HBY0 568 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 RANGRFQ9HD47 186 aaPredicted RBP6.07□□□□□ -1.44
USP39-219ENST00000496047 GLRX2Q9NS18 164 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 NKIRAS2Q9NYR9 191 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 KCNN3Q9UGI6 736 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 PIGLQ9Y2B2 252 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 ZNF175Q9Y473 711 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 VPS13AQ96RL7 3174 aa6.07□□□□□ -1.44
USP39-219ENST00000496047 A0A087WV48 116 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 A0A0A6YYJ9 748 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 TRAV17A0A0B4J275 112 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 A0A1B0GTI1 187 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 SPAARA0A1B0GVQ0 90 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms