RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 TAS2R43P59537 309 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 RAD51Q06609 339 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 LUZP6Q538Z0 58 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 MFSD14CQ5VZR4 134 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 DEGS2Q6QHC5 323 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 C16orf47Q6ZP98 133 aaPredicted RBP1.66□□□□□ -2.14
VPS50-219ENST00000495039 APRG1Q8IVJ8 170 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 STK40Q8N2I9 435 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 DRAM1Q8N682 238 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 C8orf31Q8N9H6 132 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 C1orf64Q8NEQ6 169 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 OR2Z1Q8NG97 314 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 ITFG1Q8TB96 612 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 ENKURQ8TC29 256 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 ASZ1Q8WWH4 475 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 RCN3Q96D15 328 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 MRPS30Q9NP92 439 aaKnown RBP1.66□□□□□ -2.14
VPS50-219ENST00000495039 ZC4H2Q9NQZ6 224 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 DYRK4Q9NR20 520 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 MRPL22Q9NWU5 206 aaKnown RBP1.66□□□□□ -2.14
VPS50-219ENST00000495039 TAS2R5Q9NYW4 299 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 IL37Q9NZH6 218 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 TBC1D24Q9ULP9 559 aa1.66□□□□□ -2.14
VPS50-219ENST00000495039 YARS2Q9Y2Z4 477 aaKnown RBP1.66□□□□□ -2.14
VPS50-219ENST00000495039 CAB39Q9Y376 341 aaPredicted RBP1.66□□□□□ -2.14
VPS50-219ENST00000495039 BRCA1P38398 1863 aaKnown RBP1.66□□□□□ -2.14
VPS50-219ENST00000495039 FBN3Q75N90 2809 aa1.65□□□□□ -2.14
VPS50-219ENST00000495039 A0A0A6YYD5 115 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 SERTM2A0A1B0GWG4 89 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 ISPDA4D126 451 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 OR6C70A6NIJ9 312 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 LRRIQ4A6NIV6 560 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 VGLL3A8MV65 326 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 CBR3O75828 277 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 CNMDO75829 334 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 OXTP01178 125 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 PTHP01270 115 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 TRBV12-3P01733 135 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 ASGR1P07306 291 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 CD28P10747 220 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 GALP22466 123 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 GPR1P46091 355 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 GALR1P47211 349 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 ZNF33AQ06730 810 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 BTN1A1Q13410 526 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 HADHQ16836 314 aaKnown RBP1.65□□□□□ -2.15
VPS50-219ENST00000495039 ANGPTL8Q6UXH0 198 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 RAB43Q86YS6 212 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 SGPP2Q8IWX5 399 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 OFCC1Q8IZS5 231 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 OR4M2Q8NGB6 313 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 CA5BP1Q8WTZ4 195 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 MTG1Q9BT17 334 aaPredicted RBP1.65□□□□□ -2.15
VPS50-219ENST00000495039 SFXN3Q9BWM7 321 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 LYRM4Q9HD34 91 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 PXMP2Q9NR77 195 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 TRIP11Q15643 1979 aa1.65□□□□□ -2.15
VPS50-219ENST00000495039 BAZ2AQ9UIF9 1905 aaKnown RBP1.64□□□□□ -2.15
VPS50-219ENST00000495039 GOLGA8JA6NMD2 632 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 A8MWL6 223 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 OR7C2O60412 319 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 IGLV2-8P01709 118 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 GOLGA8HP0CJ92 632 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 OR8G3PP0DMU2 310 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 OR2B8PP59922 312 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 RPEL1Q2QD12 228 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 C6orf99Q4VX62 202 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 SPIN3Q5JUX0 258 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 COMMD1Q8N668 190 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 TMEM159Q96B96 161 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 APH1AQ96BI3 265 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 TVP23CQ96ET8 276 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 SCGB3A2Q96PL1 93 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 SHANK2-AS3Q9BTD1 123 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 ANGPTL4Q9BY76 406 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 IQCGQ9H095 443 aaKnown RBP1.64□□□□□ -2.15
VPS50-219ENST00000495039 LINC00574Q9H8X3 128 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 TREX1Q9NSU2 369 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 RBFOX1Q9NWB1 397 aaKnown RBP1.64□□□□□ -2.15
VPS50-219ENST00000495039 SIGLEC7Q9Y286 467 aa1.64□□□□□ -2.15
VPS50-219ENST00000495039 SIGLEC1Q9BZZ2 1709 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 TRAV25A0A0B4J276 109 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 GOLGA8TH3BQL2 631 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 PSPHP1O15172 72 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 CTNSO60931 367 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 HMMRO75330 724 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 MPDU1O75352 247 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 MAS1P04201 325 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 IGLV7-43P04211 117 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 PFN1P07737 140 aaKnown RBP1.63□□□□□ -2.15
VPS50-219ENST00000495039 ANXA8P13928 327 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 MAGEA1P43355 309 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 RPS5P46782 204 aaKnown RBP1.63□□□□□ -2.15
VPS50-219ENST00000495039 OR1G1P47890 313 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 CLDN18P56856 261 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 PPP1CAP62136 330 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 MEF2BQ02080 365 aaPredicted RBP1.63□□□□□ -2.15
VPS50-219ENST00000495039 IRF8Q02556 426 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 BAMBIQ13145 260 aa1.63□□□□□ -2.15
VPS50-219ENST00000495039 DNAJC3Q13217 504 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms