RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 SLC36A1Q7Z2H8 476 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 DEFB107AQ8IZN7 70 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 LY6G5BQ8NDX9 201 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 OR2T33Q8NG76 320 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 LINC01006Q8NI28 216 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 SGK3Q96BR1 496 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 SP140LQ9H930 580 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 ARL8BQ9NVJ2 186 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 ARMC1Q9NVT9 282 aa18.19■□□□□ 0.5
HDDC3-203ENST00000494993 A0A1B0GVI7 797 aa18.18■□□□□ 0.5
HDDC3-203ENST00000494993 ATP6V1B2P21281 511 aa18.18■□□□□ 0.5
HDDC3-203ENST00000494993 PRSS45Q7RTY3 260 aa18.18■□□□□ 0.5
HDDC3-203ENST00000494993 FAM216BQ8N7L0 139 aa18.18■□□□□ 0.5
HDDC3-203ENST00000494993 RNF133Q8WVZ7 376 aa18.18■□□□□ 0.5
HDDC3-203ENST00000494993 MMP27Q9H306 513 aa18.18■□□□□ 0.5
HDDC3-203ENST00000494993 DPAGT1Q9H3H5 408 aa18.18■□□□□ 0.5
HDDC3-203ENST00000494993 PPP1R3EQ9H7J1 279 aa18.18■□□□□ 0.5
HDDC3-203ENST00000494993 NDE1Q9NXR1 346 aa18.18■□□□□ 0.5
HDDC3-203ENST00000494993 ACTR3BQ9P1U1 418 aa18.18■□□□□ 0.5
HDDC3-203ENST00000494993 ONECUT1Q9UBC0 465 aa18.18■□□□□ 0.5
HDDC3-203ENST00000494993 CLPXO76031 633 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 IFNGP01579 166 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 APOC1P02654 83 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 CFL1P23528 166 aaKnown RBP18.17■□□□□ 0.5
HDDC3-203ENST00000494993 NAA10P41227 235 aaPredicted RBP18.17■□□□□ 0.5
HDDC3-203ENST00000494993 PROK1P58294 105 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 KLHL12Q53G59 568 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 METAP1DQ6UB28 335 aaPredicted RBP18.17■□□□□ 0.5
HDDC3-203ENST00000494993 FAM57BQ71RH2 274 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 CPLX4Q7Z7G2 160 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 OR52H1Q8NGJ2 320 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 OR6N2Q8NGY6 317 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 LRTOMTQ8WZ04 291 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 C12orf43Q96C57 262 aaKnown RBP18.17■□□□□ 0.5
HDDC3-203ENST00000494993 SEH1LQ96EE3 360 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 DMRTB1Q96MA1 342 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 INTS14Q96SY0 518 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 ABHD6Q9BV23 337 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 DGCR6LQ9BY27 220 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 TLNRD1Q9H1K6 362 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 DNAJC27Q9NZQ0 273 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 FAM96BQ9Y3D0 163 aa18.17■□□□□ 0.5
HDDC3-203ENST00000494993 RIIAD1A6NNX1 92 aa18.16■□□□□ 0.5
HDDC3-203ENST00000494993 ACOT8O14734 319 aa18.16■□□□□ 0.5
HDDC3-203ENST00000494993 ZNF3P17036 446 aa18.16■□□□□ 0.5
HDDC3-203ENST00000494993 GNALP38405 381 aa18.16■□□□□ 0.5
HDDC3-203ENST00000494993 GSK3AP49840 483 aa18.16■□□□□ 0.5
HDDC3-203ENST00000494993 ZNF121P58317 390 aaPredicted RBP18.16■□□□□ 0.5
HDDC3-203ENST00000494993 MXRA7P84157 204 aa18.16■□□□□ 0.5
HDDC3-203ENST00000494993 GFOD2Q3B7J2 385 aa18.16■□□□□ 0.5
HDDC3-203ENST00000494993 ASPHD2Q6ICH7 369 aa18.16■□□□□ 0.5
HDDC3-203ENST00000494993 GDPGP1Q6ZNW5 385 aa18.16■□□□□ 0.5
HDDC3-203ENST00000494993 ERI1Q8IV48 349 aaKnown RBP18.16■□□□□ 0.5
HDDC3-203ENST00000494993 CSNK2A3Q8NEV1 391 aa18.16■□□□□ 0.5
HDDC3-203ENST00000494993 RBM4BQ9BQ04 359 aaKnown RBP18.16■□□□□ 0.5
HDDC3-203ENST00000494993 PAPOLGQ9BWT3 736 aaKnown RBP18.16■□□□□ 0.5
HDDC3-203ENST00000494993 SIRT7Q9NRC8 400 aa18.16■□□□□ 0.5
HDDC3-203ENST00000494993 CMC2Q9NRP2 79 aa18.16■□□□□ 0.5
HDDC3-203ENST00000494993 VNN3Q9NY84 501 aa18.16■□□□□ 0.5
HDDC3-203ENST00000494993 ZNF319Q9P2F9 582 aa18.16■□□□□ 0.5
HDDC3-203ENST00000494993 PRPF19Q9UMS4 504 aaKnown RBP18.16■□□□□ 0.5
HDDC3-203ENST00000494993 CAB39Q9Y376 341 aaPredicted RBP18.16■□□□□ 0.5
HDDC3-203ENST00000494993 TCRBV5S2A0A599 114 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 CDIPTO14735 213 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 GPR37O15354 613 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 NDUFB3O43676 98 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 FBP1P09467 338 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 AMY2BP19961 511 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 MICAQ29983 383 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 STUMQ69YW2 141 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 CMTM4Q8IZR5 234 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 GALNT4Q8N4A0 578 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 ZSCAN4Q8NAM6 433 aaPredicted RBP18.15■□□□□ 0.5
HDDC3-203ENST00000494993 NPRL2Q8WTW4 380 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 ITPKCQ96DU7 683 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 AMELYQ99218 206 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 MICU1Q9BPX6 476 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 DCTN5Q9BTE1 182 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 OR10A2Q9H208 303 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 SEMA6AQ9H2E6 1030 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 MAGIXQ9H6Y5 334 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 MED20Q9H944 212 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 BRD7Q9NPI1 651 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 ZNRD1Q9P1U0 126 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 RHBDD3Q9Y3P4 386 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 U3KQV3 271 aa18.15■□□□□ 0.5
HDDC3-203ENST00000494993 FAM183AA6NL82 134 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 GSTT1P30711 240 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 OPRL1P41146 370 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 TGM4P49221 684 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 IL5RAQ01344 420 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 GUCA2AQ02747 115 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 IKZF1Q13422 519 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 SNCBQ16143 134 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 TAF9Q16594 264 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 LRRC10Q5BKY1 277 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 ATPAF1Q5TC12 328 aaPredicted RBP18.14■□□□□ 0.49
HDDC3-203ENST00000494993 OR2T5Q6IEZ7 315 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 Q6ZSV7 163 aa18.14■□□□□ 0.49
HDDC3-203ENST00000494993 SHFQ7M4L6 423 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms