RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 LRRC29Q8WV35 223 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 ITPKCQ96DU7 683 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 LYZL4Q96KX0 146 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 WDFY2Q96P53 400 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 CHID1Q9BWS9 393 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 CHIAQ9BZP6 476 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 WDR13Q9H1Z4 485 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 OR51V1Q9H2C8 321 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 OPA3Q9H6K4 179 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 PRPF19Q9UMS4 504 aaKnown RBP9.62□□□□□ -0.87
VTI1A-208ENST00000494728 NOP16Q9Y3C1 178 aaKnown RBP9.62□□□□□ -0.87
VTI1A-208ENST00000494728 DSCAML1Q8TD84 2053 aa9.62□□□□□ -0.87
VTI1A-208ENST00000494728 TRAV38-1A0A0B4J264 116 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 ARRDC5A6NEK1 342 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 FAM181BA6NEQ2 426 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 ANKRD30BLA7E2S9 258 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 SRRM5B3KS81 715 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 DYNC1I1O14576 645 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 TOX4O94842 621 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 FAM107AO95990 144 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 MELTFP08582 738 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 PRKACGP22612 351 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 SLC2A5P22732 501 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 POU1F1P28069 291 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 SLC15A1P46059 708 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 NPY4RP50391 375 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 HCCSP53701 268 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 GINS1Q14691 196 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 TMEM236Q5W0B7 351 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 BTN2A1Q7KYR7 527 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 CCDC197Q8NCU1 140 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 OR8B12Q8NGG6 310 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 OR8S1Q8NH09 359 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 OTOSQ8NHW6 89 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 HPSE2Q8WWQ2 592 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 ST8SIA4Q92187 359 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 TMIGD2Q96BF3 282 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 CCL13Q99616 98 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 THTPAQ9BU02 230 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 PAPOLGQ9BWT3 736 aaKnown RBP9.61□□□□□ -0.87
VTI1A-208ENST00000494728 TLNRD1Q9H1K6 362 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 SEMA6AQ9H2E6 1030 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 TOR3AQ9H497 397 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 PDP1Q9P0J1 537 aaPredicted RBP9.61□□□□□ -0.87
VTI1A-208ENST00000494728 ERVK-18Q9QC07 812 aa9.61□□□□□ -0.87
VTI1A-208ENST00000494728 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.6□□□□□ -0.87
VTI1A-208ENST00000494728 A0A0U1RQK1 487 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 M0R129 80 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 CDIPTO14735 213 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 PSMA6P60900 246 aaKnown RBP9.6□□□□□ -0.87
VTI1A-208ENST00000494728 GMFBP60983 142 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 ARF6P62330 175 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 KCNJ8Q15842 424 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 DMRTC1Q5HYR2 192 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 STUMQ69YW2 141 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 C16orf87Q6PH81 154 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 FIP1L1Q6UN15 594 aaKnown RBP9.6□□□□□ -0.87
VTI1A-208ENST00000494728 SHISA2Q6UWI4 295 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 Q6YL49 198 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 CPOQ8IVL8 374 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 SPERTQ8NA61 448 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 RPL3LQ92901 407 aaKnown RBP9.6□□□□□ -0.87
VTI1A-208ENST00000494728 LHX4Q969G2 390 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 TTTY10Q9BZA0 68 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 C14orf119Q9NWQ9 140 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 C1RLQ9NZP8 487 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 KAAG1Q9UBP8 84 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 RPUSD1Q9UJJ7 312 aaKnown RBP9.6□□□□□ -0.87
VTI1A-208ENST00000494728 LRP12Q9Y561 859 aa9.6□□□□□ -0.87
VTI1A-208ENST00000494728 IGHV1-69DA0A0B4J2H0 117 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 CCDC182A6NF36 153 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 ZNF850A8MQ14 1090 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 PRR23D1E9PI22 279 aaPredicted RBP9.59□□□□□ -0.87
VTI1A-208ENST00000494728 PSMD9O00233 223 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 P2RY10O00398 339 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 IGHV1-69P01742 117 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 LYNP07948 512 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 H2BFMP0C1H6 154 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 PRR23D2P0DMB1 279 aaPredicted RBP9.59□□□□□ -0.87
VTI1A-208ENST00000494728 DDOSTP39656 456 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 BLVRAP53004 296 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 KRTAP10-3P60369 221 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 IL13RA1P78552 427 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 CDK5Q00535 292 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 PRDX4Q13162 271 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 CD276Q5ZPR3 534 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 VMO1Q7Z5L0 202 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 OR5T2Q8NGG2 359 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 OR52H1Q8NGJ2 320 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 THEM6Q8WUY1 208 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 WFDC12Q8WWY7 111 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 ZDHHC16Q969W1 377 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 PGAM5Q96HS1 289 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 LRGUKQ96M69 825 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 OR10A2Q9H208 303 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 C1orf21Q9H246 121 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 ZNF696Q9H7X3 374 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 RNPEPL1Q9HAU8 725 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 SNTG1Q9NSN8 517 aa9.59□□□□□ -0.87
VTI1A-208ENST00000494728 ACOXLQ9NUZ1 547 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms