RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 PRDM6Q9NQX0 595 aa10.45□□□□□ -0.74
COL25A1-204ENST00000494183 COL6A6A6NMZ7 2263 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 LRRC37AA6NMS7 1700 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 CT45A8P0DMV1 189 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 CT45A9P0DMV2 189 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 BAK1Q16611 211 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 CT45A2Q5DJT8 189 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 CD300LDQ6UXZ3 194 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 SLC51BQ86UW2 128 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 MALSU1Q96EH3 234 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 RNF150Q9ULK6 438 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 RPH3ALQ9UNE2 315 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 OR5H15A6NDH6 313 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 C1orf196B1AJZ1 125 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 PTHLHP12272 177 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 ATF1P18846 271 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 AADACP22760 399 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 AVPR2P30518 371 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 GPR12P47775 334 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 NKX6-1P78426 367 aaPredicted RBP10.44□□□□□ -0.74
COL25A1-204ENST00000494183 RAB35Q15286 201 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 MAMSTRQ6ZN01 415 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 TSEN54Q7Z6J9 526 aaKnown RBP10.44□□□□□ -0.74
COL25A1-204ENST00000494183 CISD2Q8N5K1 135 aaKnown RBP10.44□□□□□ -0.74
COL25A1-204ENST00000494183 BORCS7Q96B45 105 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 PLPPR2Q96GM1 343 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 UCK1Q9HA47 277 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 SSUH2Q9Y2M2 353 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 WISP3O95389 354 aaPredicted RBP10.44□□□□□ -0.74
COL25A1-204ENST00000494183 CNR1P21554 472 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 PRSS12P56730 875 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 DEGS2Q6QHC5 323 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 OR5H6Q8NGV6 325 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 OR10X1Q8NGY0 326 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 UBALD1Q8TB05 177 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 S1PR3Q99500 378 aa10.44□□□□□ -0.74
COL25A1-204ENST00000494183 MEX3AA1L020 520 aaKnown RBP10.43□□□□□ -0.74
COL25A1-204ENST00000494183 LRP5LA4QPB2 252 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 NPIPB8E9PQR5 432 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 C17orf112F2Z3M2 114 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 HPP00738 406 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 CCL3P10147 92 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 CCL2P13500 99 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 LSM11P83369 360 aaKnown RBP eCLIP10.43□□□□□ -0.74
COL25A1-204ENST00000494183 OR2AK2Q8NG84 335 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 PLK3Q9H4B4 646 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 QPCTLQ9NXS2 382 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 PCYT1BQ9Y5K3 369 aaPredicted RBP10.43□□□□□ -0.74
COL25A1-204ENST00000494183 PUS1Q9Y606 427 aaKnown RBP eCLIP10.43□□□□□ -0.74
COL25A1-204ENST00000494183 FGF9P31371 208 aaPredicted RBP10.43□□□□□ -0.74
COL25A1-204ENST00000494183 THBS4P35443 961 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 GNG3P63215 75 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 TESK1Q15569 626 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 XAF1Q6GPH4 301 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 OR2Z1Q8NG97 314 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 M1APQ8TC57 530 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 APOBEC4Q8WW27 367 aaKnown RBP10.43□□□□□ -0.74
COL25A1-204ENST00000494183 ADGRL4Q9HBW9 690 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 NPAP1Q9NZP6 1156 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 XRCC3O43542 346 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 PLPP2O43688 288 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 SNRNP200O75643 2136 aaKnown RBP10.43□□□□□ -0.74
COL25A1-204ENST00000494183 GUCA2AQ02747 115 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 KISS1Q15726 138 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 FXNQ16595 210 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 SMIM21Q3B7S5 101 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 NLRC3Q7RTR2 1065 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 C17orf47Q8NEP4 570 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 RNF141Q8WVD5 230 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 SPSB1Q96BD6 273 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 C12orf10Q9HB07 376 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 DTX4Q9Y2E6 619 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 CCDC88CQ9P219 2028 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 IGKV1-8A0A0C4DH67 115 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 SULT1C2O00338 296 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 PDGFBP01127 241 aaPredicted RBP10.43□□□□□ -0.74
COL25A1-204ENST00000494183 GABRB1P18505 474 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 SLC25A45Q8N413 288 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 ARHGEF39Q8N4T4 335 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 OR13C8Q8NGS7 320 aa10.43□□□□□ -0.74
COL25A1-204ENST00000494183 RTN4IP1Q8WWV3 396 aaPredicted RBP10.43□□□□□ -0.74
COL25A1-204ENST00000494183 DAZAP1Q96EP5 407 aaKnown RBP10.43□□□□□ -0.74
COL25A1-204ENST00000494183 PARP12Q9H0J9 701 aaKnown RBP10.43□□□□□ -0.74
COL25A1-204ENST00000494183 C21orf140B9A014 251 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 CHATP28329 748 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 HTD2P86397 168 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 TLE4Q04727 773 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 TMEM268Q5VZI3 342 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 ATG4DQ86TL0 474 aaPredicted RBP10.42□□□□□ -0.74
COL25A1-204ENST00000494183 OR4S1Q8NGB4 309 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 SMIM4Q8WVI0 70 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 NRXN2Q9P2S2 1712 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 YIF1AO95070 293 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 WNT1P04628 370 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 FUT3P21217 361 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 CA6P23280 308 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 C3AR1Q16581 482 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 ISXQ2M1V0 245 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 SPANXN5Q5MJ07 72 aa10.42□□□□□ -0.74
COL25A1-204ENST00000494183 LSMEM1Q8N8F7 131 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms