RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 ZDHHC16Q969W1 377 aa11.36□□□□□ -0.59
IRF1-210ENST00000493208 UPRTQ96BW1 309 aa11.36□□□□□ -0.59
IRF1-210ENST00000493208 MOB1AQ9H8S9 216 aa11.36□□□□□ -0.59
IRF1-210ENST00000493208 MED20Q9H944 212 aa11.36□□□□□ -0.59
IRF1-210ENST00000493208 KRT84Q9NSB2 600 aa11.36□□□□□ -0.59
IRF1-210ENST00000493208 TVP23BQ9NYZ1 205 aa11.36□□□□□ -0.59
IRF1-210ENST00000493208 DNAJB11Q9UBS4 358 aa11.36□□□□□ -0.59
IRF1-210ENST00000493208 CAB39Q9Y376 341 aaPredicted RBP11.36□□□□□ -0.59
IRF1-210ENST00000493208 DNHD1Q96M86 4753 aa11.36□□□□□ -0.59
IRF1-210ENST00000493208 hCG_38984A0A1B0GV85 526 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 CLDN34H7C241 214 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 TMPRSS2O15393 492 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 PRTN3P24158 256 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 RIDAP52758 137 aaKnown RBP11.35□□□□□ -0.59
IRF1-210ENST00000493208 PRSS12P56730 875 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 UBA52P62987 128 aaKnown RBP11.35□□□□□ -0.59
IRF1-210ENST00000493208 APOFQ13790 326 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 PDCD1Q15116 288 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 MPPED2Q15777 294 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 LRRC10Q5BKY1 277 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 SFRP4Q6FHJ7 346 aaPredicted RBP11.35□□□□□ -0.59
IRF1-210ENST00000493208 C9orf139Q6ZV77 190 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 GID4Q8IVV7 300 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 ZDHHC23Q8IYP9 409 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 OR1M1Q8NGA1 313 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 OR10Z1Q8NGY1 313 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 ZNRF4Q8WWF5 429 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 SGK3Q96BR1 496 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 MYCBPQ99417 103 aaPredicted RBP11.35□□□□□ -0.59
IRF1-210ENST00000493208 CNN2Q99439 309 aaKnown RBP11.35□□□□□ -0.59
IRF1-210ENST00000493208 DNTTIP1Q9H147 329 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 ORC6Q9Y5N6 252 aa11.35□□□□□ -0.59
IRF1-210ENST00000493208 SVEP1Q4LDE5 3571 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 TRAV40A0A0B4J280 105 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 TMEM269A0A1B0GVZ9 245 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 TMEM89A2RUT3 159 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 NDUFB3O43676 98 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 TOX4O94842 621 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 CST4P01036 141 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 CRYBA1P05813 215 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 CD80P33681 288 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 POU4F2Q12837 409 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 BNIP1Q12981 228 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 ZBTB37Q5TC79 503 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 SIGLECL1Q8N7X8 197 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 SGMS2Q8NHU3 365 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 ZNF671Q8TAW3 534 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 LRRC29Q8WV35 223 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 GATAD2BQ8WXI9 593 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 C22orf15Q8WYQ4 148 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 DVL3Q92997 716 aaPredicted RBP11.34□□□□□ -0.59
IRF1-210ENST00000493208 MED30Q96HR3 178 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 NOX4Q9NPH5 578 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 KAAG1Q9UBP8 84 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 IKZF2Q9UKS7 526 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 AP4S1Q9Y587 144 aa11.34□□□□□ -0.59
IRF1-210ENST00000493208 CUBNO60494 3623 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 A0A0U1RQV5 110 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 ZNF816-ZNF321PA0A0X1KG74 233 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 ZNF879B4DU55 563 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 SELENOFO60613 162 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 PRKACGP22612 351 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 CFHR2P36980 270 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 PMELP40967 661 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 RIPPLY1Q0D2K3 151 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 BLMHQ13867 455 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 PTGES3Q15185 160 aaKnown RBP11.33□□□□□ -0.6
IRF1-210ENST00000493208 ATP6AP1Q15904 470 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 TEX36Q5VZQ5 186 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 ZNF679Q8IYX0 411 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 RFKQ969G6 155 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 SLC7A6OSQ96CW6 309 aaPredicted RBP11.33□□□□□ -0.6
IRF1-210ENST00000493208 FAM71F1Q96KD3 344 aaPredicted RBP11.33□□□□□ -0.6
IRF1-210ENST00000493208 TEAD3Q99594 435 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 ZNF69Q9UC07 566 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 LRP12Q9Y561 859 aa11.33□□□□□ -0.6
IRF1-210ENST00000493208 FBN3Q75N90 2809 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 A0A1B0GUS0 222 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 A0A1B0GVI7 797 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 A0A1W2PPH5 198 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 OR5B21A6NL26 309 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 SNTNA6NMZ2 147 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 ZNF670-ZNF695F2Z2N8 137 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 GYPAP02724 150 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 RNASE1P07998 156 aaKnown RBP11.32□□□□□ -0.6
IRF1-210ENST00000493208 ALOX5APP20292 161 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 ATP6V1E1P36543 226 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 FGF12P61328 243 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 GNG3P63215 75 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 IL13RA1P78552 427 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 GUCA2AQ02747 115 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 DBPQ10586 325 aaPredicted RBP11.32□□□□□ -0.6
IRF1-210ENST00000493208 PRDX4Q13162 271 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 FAM201AQ5SY85 155 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 NXNL2Q5VZ03 156 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 FAHD1Q6P587 224 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 ST8SIA4Q92187 359 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 PIGCQ92535 297 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 RNF170Q96K19 258 aa11.32□□□□□ -0.6
IRF1-210ENST00000493208 PCGF1Q9BSM1 259 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms