RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 CGB2Q6NT52 195 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 C1orf94Q6P1W5 598 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 TSEN54Q7Z6J9 526 aaKnown RBP7.62□□□□□ -1.19
HDAC3-212ENST00000492407 FITM2Q8N6M3 262 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 SLC7A6Q92536 515 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 DGCR14Q96DF8 476 aaKnown RBP7.62□□□□□ -1.19
HDAC3-212ENST00000492407 FAM46AQ96IP4 442 aaKnown RBP7.62□□□□□ -1.19
HDAC3-212ENST00000492407 DMRTB1Q96MA1 342 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 CITED2Q99967 270 aaPredicted RBP7.62□□□□□ -1.19
HDAC3-212ENST00000492407 BEX1Q9HBH7 125 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 NDUFAF4Q9P032 175 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 ABCD2Q9UBJ2 740 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 B9D1Q9UPM9 204 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 SAMD4AQ9UPU9 718 aaKnown RBP7.62□□□□□ -1.19
HDAC3-212ENST00000492407 POLR1DQ9Y2S0 133 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 LHFPL6Q9Y693 200 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 POMT1Q9Y6A1 747 aa7.62□□□□□ -1.19
HDAC3-212ENST00000492407 F5H5P2 479 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 NME4O00746 187 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 SOCS2O14508 198 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 DENRO43583 198 aaKnown RBP7.61□□□□□ -1.19
HDAC3-212ENST00000492407 NDUFA7O95182 113 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 CYB5R3P00387 301 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-212ENST00000492407 RENP00797 406 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 DBHP09172 617 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 ACSM4P0C7M7 580 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 IGHV4-38-2P0DP08 117 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 SLC6A6P31641 620 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 IFNGR2P38484 337 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 PMELP40967 661 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 HOXA1P49639 335 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-212ENST00000492407 GSK3BP49841 420 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 RAD23AP54725 363 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 TPTEP56180 551 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 FXYD6P3P58550 94 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 MAB21L1Q13394 359 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 GK2Q14410 553 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-212ENST00000492407 C21orf62-AS1Q17RA5 79 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 ZNF674Q2M3X9 581 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 GPR157Q5UAW9 335 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 C1orf146Q5VVC0 180 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 FOXB2Q5VYV0 432 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 WDR25Q64LD2 544 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-212ENST00000492407 DEGS2Q6QHC5 323 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 Q6YL49 198 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 ZNF841Q6ZN19 808 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 MOGAT3Q86VF5 341 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 OR5AS1Q8N127 324 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 OR6V1Q8N148 313 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 SLC26A10Q8NG04 563 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 OR10AD1Q8NGE0 317 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 OR10S1Q8NGN2 331 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 OR2AJ1Q8NGZ0 328 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 OR4F5Q8NH21 305 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 OR52N1Q8NH53 320 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 ZNF420Q8TAQ5 688 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-212ENST00000492407 FAM162AQ96A26 154 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 CMTM5Q96DZ9 223 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 ATP6V0BQ99437 205 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 ATF6BQ99941 703 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 KCTD14Q9BQ13 255 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-212ENST00000492407 FUZQ9BT04 418 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 CDADC1Q9BWV3 514 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 RERGLQ9H628 205 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 DCAF13Q9NV06 445 aaKnown RBP7.61□□□□□ -1.19
HDAC3-212ENST00000492407 ERVK-18Q9QC07 812 aa7.61□□□□□ -1.19
HDAC3-212ENST00000492407 TRRAPQ9Y4A5 3859 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 LOC100506127A0A0U1RQW1 187 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 H0YJX3 145 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 H0YL77 283 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 WRBO00258 174 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 TNFRSF13BO14836 293 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-212ENST00000492407 KCNAB3O43448 404 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 CRYBA1P05813 215 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 ACAA1P09110 424 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-212ENST00000492407 GMFBP60983 142 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 SPCS3P61009 180 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 DYRK1AQ13627 763 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 PDCD1Q15116 288 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 LRRC36Q1X8D7 754 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 C2orf76Q3KRA6 126 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 PDLIM3Q53GG5 364 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-212ENST00000492407 FGD3Q5JSP0 725 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 CLEC12AQ5QGZ9 265 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 GLYATQ6IB77 296 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 SLC18B1Q6NT16 456 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 PGAP1Q75T13 922 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 CPLX4Q7Z7G2 160 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 TPRA1Q86W33 373 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 PNLDC1Q8NA58 520 aaKnown RBP7.6□□□□□ -1.19
HDAC3-212ENST00000492407 SPRYD4Q8WW59 207 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-212ENST00000492407 SPTSSAQ969W0 71 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 ZDHHC16Q969W1 377 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 ERMAPQ96PL5 475 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-212ENST00000492407 DUX5Q96PT3 197 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 PITX2Q99697 317 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 KCNJ15Q99712 375 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 SPXQ9BT56 116 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 OPA3Q9H6K4 179 aa7.6□□□□□ -1.19
HDAC3-212ENST00000492407 FN3KRPQ9HA64 309 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms