RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 SSX3Q99909 188 aa16.86■□□□□ 0.29
CLIP2-208ENST00000491075 HOPXQ9BPY8 73 aaPredicted RBP16.86■□□□□ 0.29
CLIP2-208ENST00000491075 KCTD14Q9BQ13 255 aaPredicted RBP16.86■□□□□ 0.29
CLIP2-208ENST00000491075 TOR3AQ9H497 397 aa16.86■□□□□ 0.29
CLIP2-208ENST00000491075 NECAP2Q9NVZ3 263 aa16.86■□□□□ 0.29
CLIP2-208ENST00000491075 NOTCH3Q9UM47 2321 aa16.86■□□□□ 0.29
CLIP2-208ENST00000491075 NDUFAB1O14561 156 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 SELLP14151 372 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 AMY2BP19961 511 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 PYCR1P32322 319 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 SMIM11AP58511 58 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 SLC16A9Q7RTY1 509 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 DTX3Q8N9I9 347 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 OR4S1Q8NGB4 309 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 OR51G2Q8NGK0 314 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 OR2T4Q8NH00 348 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 CLPTM1LQ96KA5 538 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 TLNRD1Q9H1K6 362 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 HAO2Q9NYQ3 351 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 N6AMT1Q9Y5N5 214 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 COMMD3-BMI1R4GMX3 469 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 DNAH3Q8TD57 4116 aa16.85■□□□□ 0.29
CLIP2-208ENST00000491075 TVP23AA6NH52 213 aa16.84■□□□□ 0.29
CLIP2-208ENST00000491075 ZNF878C9JN71 531 aa16.84■□□□□ 0.29
CLIP2-208ENST00000491075 GADD45GO95257 159 aa16.84■□□□□ 0.29
CLIP2-208ENST00000491075 PSKH1P11801 424 aa16.84■□□□□ 0.29
CLIP2-208ENST00000491075 FAM3AP98173 230 aa16.84■□□□□ 0.29
CLIP2-208ENST00000491075 BLMHQ13867 455 aa16.84■□□□□ 0.29
CLIP2-208ENST00000491075 LRRC75BQ2VPJ9 315 aa16.84■□□□□ 0.29
CLIP2-208ENST00000491075 OXLD1Q5BKU9 147 aa16.84■□□□□ 0.29
CLIP2-208ENST00000491075 SLC35F1Q5T1Q4 408 aa16.84■□□□□ 0.29
CLIP2-208ENST00000491075 C8orf82Q6P1X6 216 aaPredicted RBP16.84■□□□□ 0.29
CLIP2-208ENST00000491075 CYB561A3Q8NBI2 242 aa16.84■□□□□ 0.29
CLIP2-208ENST00000491075 OR9Q1Q8NGQ5 310 aa16.84■□□□□ 0.29
CLIP2-208ENST00000491075 SLAMF6Q96DU3 332 aa16.84■□□□□ 0.29
CLIP2-208ENST00000491075 CENPMQ9NSP4 180 aa16.84■□□□□ 0.29
CLIP2-208ENST00000491075 FGFR1OP2Q9NVK5 253 aa16.84■□□□□ 0.29
CLIP2-208ENST00000491075 SLC25A10Q9UBX3 287 aaPredicted RBP16.84■□□□□ 0.29
CLIP2-208ENST00000491075 SAMD4AQ9UPU9 718 aaKnown RBP16.84■□□□□ 0.29
CLIP2-208ENST00000491075 SF3B6Q9Y3B4 125 aaKnown RBP16.84■□□□□ 0.29
CLIP2-208ENST00000491075 A0A1W2PQ09 198 aa16.83■□□□□ 0.28
CLIP2-208ENST00000491075 CDIPTO14735 213 aa16.83■□□□□ 0.28
CLIP2-208ENST00000491075 TBX1O43435 398 aa16.83■□□□□ 0.28
CLIP2-208ENST00000491075 SPARCP09486 303 aa16.83■□□□□ 0.28
CLIP2-208ENST00000491075 GNALP38405 381 aa16.83■□□□□ 0.28
CLIP2-208ENST00000491075 SF3A3Q12874 501 aaKnown RBP eCLIP16.83■□□□□ 0.28
CLIP2-208ENST00000491075 LY6EQ16553 131 aa16.83■□□□□ 0.28
CLIP2-208ENST00000491075 AANATQ16613 207 aa16.83■□□□□ 0.28
CLIP2-208ENST00000491075 TIGD6Q17RP2 521 aa16.83■□□□□ 0.28
CLIP2-208ENST00000491075 ZNF788Q6ZQV5 615 aa16.83■□□□□ 0.28
CLIP2-208ENST00000491075 OR5T2Q8NGG2 359 aa16.83■□□□□ 0.28
CLIP2-208ENST00000491075 SGCDQ92629 289 aa16.83■□□□□ 0.28
CLIP2-208ENST00000491075 MED30Q96HR3 178 aa16.83■□□□□ 0.28
CLIP2-208ENST00000491075 NPFFR1Q9GZQ6 430 aa16.83■□□□□ 0.28
CLIP2-208ENST00000491075 AURKAIP1Q9NWT8 199 aaPredicted RBP16.83■□□□□ 0.28
CLIP2-208ENST00000491075 VSIG10L2P0DP72 767 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 CFL1P23528 166 aaKnown RBP16.82■□□□□ 0.28
CLIP2-208ENST00000491075 IFNGR2P38484 337 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 GSSP48637 474 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 ENTPD1P49961 510 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 CAV3P56539 151 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 GRB2P62993 217 aaKnown RBP16.82■□□□□ 0.28
CLIP2-208ENST00000491075 SPIBQ01892 262 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 CGB2Q6NT52 195 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 CRIP3Q6Q6R5 217 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 LYPD4Q6UWN0 246 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 LIAT1Q6ZQX7 453 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 FAM86B1Q8N7N1 296 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 OR5D13Q8NGL4 314 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 OR10Z1Q8NGY1 313 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 REEP6Q96HR9 211 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 GAFA1Q96PS6 74 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 RAB3IPQ96QF0 476 aaPredicted RBP16.82■□□□□ 0.28
CLIP2-208ENST00000491075 MICU1Q9BPX6 476 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 PAPOLGQ9BWT3 736 aaKnown RBP16.82■□□□□ 0.28
CLIP2-208ENST00000491075 SP140LQ9H930 580 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 SNTG1Q9NSN8 517 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 DCAF13Q9NV06 445 aaKnown RBP16.82■□□□□ 0.28
CLIP2-208ENST00000491075 CD300AQ9UGN4 299 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 ZNF391Q9UJN7 358 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 COL7A1Q02388 2944 aa16.82■□□□□ 0.28
CLIP2-208ENST00000491075 hCG_38984A0A1B0GV85 526 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 FBXO24O75426 580 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 ANXA2P07355 339 aaKnown RBP16.81■□□□□ 0.28
CLIP2-208ENST00000491075 COX4I1P13073 169 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 SLC15A1P46059 708 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 CX3CR1P49238 355 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 IL5RAQ01344 420 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 SNCBQ16143 134 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 FTMTQ8N4E7 242 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 CSNK2A3Q8NEV1 391 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 OR52L1Q8NGH7 329 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 C17orf50Q8WW18 174 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 ZNRF4Q8WWF5 429 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 RORBQ92753 470 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 DUS3LQ96G46 650 aaKnown RBP16.81■□□□□ 0.28
CLIP2-208ENST00000491075 DDOQ99489 341 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 MEGF9Q9H1U4 602 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 WDR13Q9H1Z4 485 aa16.81■□□□□ 0.28
CLIP2-208ENST00000491075 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms