RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 RBMY1A1P0DJD3 496 aaKnown RBP3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 COX5BP10606 129 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 NQO1P15559 274 aaKnown RBP3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 TBPP20226 339 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 PSMB5P28074 263 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 HSD11B1P28845 292 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 COILP38432 576 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 SERPINB8P50452 374 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 SERPINB9P50453 376 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 CCR6P51684 374 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 RAP1GDS1P52306 607 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 NKX2-5P52952 324 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 ST3GAL4Q11206 333 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 STX4Q12846 297 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 SLC39A6Q13433 755 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 TMED2Q15363 201 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 ZBED5Q49AG3 693 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 LRRC10Q5BKY1 277 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 PDZD11Q5EBL8 140 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 CPTPQ5TA50 214 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 TSPO2Q5TGU0 170 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 RWDD4Q6NW29 188 aaKnown RBP3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 CAMK2N1Q7Z7J9 78 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 AKAP14Q86UN6 197 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 TMEM25Q86YD3 366 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 PUSL1Q8N0Z8 303 aaKnown RBP3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 Q8N402 240 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 TMEM156Q8N614 296 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 ZNF557Q8N988 423 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 OR8K1Q8NGG5 319 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 TMEM158Q8WZ71 300 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 RNF185Q96GF1 192 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 SCGB3A2Q96PL1 93 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 RARRES2Q99969 163 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 SLC17A9Q9BYT1 436 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 DSN1Q9H410 356 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 RNF167Q9H6Y7 350 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 MRPL40Q9NQ50 206 aaKnown RBP3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 IFT46Q9NQC8 304 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 FGFR1OP2Q9NVK5 253 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 SLC25A37Q9NYZ2 338 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 DEC1Q9P2X7 70 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 RAB23Q9ULC3 237 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 ELP1O95163 1332 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 MAP3K5Q99683 1374 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 NACAE9PAV3 2078 aa3.07□□□□□ -1.92
HMGB1P38-201ENST00000490557 IGLV3-22A0A075B6J6 115 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 H3BQV1 296 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 DFFAO00273 331 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 LYPLA2O95372 231 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 RAB3DO95716 219 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 RAB36O95755 333 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 ARG1P05089 322 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 CT45A6P0DMU7 189 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 CT45A5P0DMU8 189 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 CT45A7P0DMV0 189 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 HSPD1P10809 573 aaKnown RBP3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 HCAR3P49019 387 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 HMGCS1Q01581 520 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 PRKCDQ05655 676 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 DYNC1I2Q13409 638 aaKnown RBP3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 RAB31Q13636 194 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 RFX4Q33E94 735 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 CT45A1Q5HYN5 189 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 TIMM23BQ5SRD1 257 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 TPTE2P1Q5T6R2 138 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 LCE3AQ5TA76 89 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 OGFRL1Q5TC84 451 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 RESP18Q5W5W9 173 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 LPCAT4Q643R3 524 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 THOC7Q6I9Y2 204 aaKnown RBP3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 WDR82Q6UXN9 313 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 TMEM150AQ86TG1 271 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 MRPL52Q86TS9 123 aaKnown RBP3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 HORMAD1Q86X24 394 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 LRRC52Q8N7C0 313 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 OR5M1Q8NGP8 315 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 CT45A3Q8NHU0 189 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 SFXN5Q8TD22 340 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 DOK4Q8TEW6 326 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 WDR34Q96EX3 536 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 DYNLL2Q96FJ2 89 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 CCDC42Q96M95 316 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 TSNAXQ99598 290 aaKnown RBP3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 MRPS26Q9BYN8 205 aaKnown RBP3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 CLMPQ9H6B4 373 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 HRASLSQ9HDD0 168 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 CYTL1Q9NRR1 136 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 FBXL3Q9UKT7 428 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 TP53TG5Q9Y2B4 290 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 SNX24Q9Y343 169 aa3.06□□□□□ -1.92
HMGB1P38-201ENST00000490557 ARHGAP21Q5T5U3 1957 aa3.05□□□□□ -1.92
HMGB1P38-201ENST00000490557 FANCIQ9NVI1 1328 aa3.05□□□□□ -1.92
HMGB1P38-201ENST00000490557 IGLV4-69A0A075B6H9 119 aa3.05□□□□□ -1.92
HMGB1P38-201ENST00000490557 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P38-201ENST00000490557 IGHV3-64DA0A0J9YX35 117 aa3.05□□□□□ -1.92
HMGB1P38-201ENST00000490557 ZNF816-ZNF321PA0A0X1KG74 233 aa3.05□□□□□ -1.92
HMGB1P38-201ENST00000490557 E5RI56 91 aa3.05□□□□□ -1.92
HMGB1P38-201ENST00000490557 FTCDNL1E5RQL4 147 aa3.05□□□□□ -1.92
HMGB1P38-201ENST00000490557 KRTAP4-16G5E9R7 235 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms