RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 LRRC75BQ2VPJ9 315 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 HCP5Q6MZN7 132 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 PGBD2Q6P3X8 592 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 ZNF788Q6ZQV5 615 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 CYP4Z1Q86W10 505 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 PAPD5Q8NDF8 572 aaKnown RBP6.66□□□□□ -1.34
USP39-216ENST00000490193 OR1M1Q8NGA1 313 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 OR4F17Q8NGA8 305 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 OR51G2Q8NGK0 314 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 CLPTM1LQ96KA5 538 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 ERMAPQ96PL5 475 aaPredicted RBP6.66□□□□□ -1.34
USP39-216ENST00000490193 OR4F4Q96R69 305 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 NMNAT3Q96T66 252 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 FUZQ9BT04 418 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 NPFFR1Q9GZQ6 430 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 SERTAD4Q9NUC0 356 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 GID8Q9NWU2 228 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 MRPL22Q9NWU5 206 aaKnown RBP6.66□□□□□ -1.34
USP39-216ENST00000490193 ADA2Q9NZK5 511 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 AP3M1Q9Y2T2 418 aa6.66□□□□□ -1.34
USP39-216ENST00000490193 SF3B6Q9Y3B4 125 aaKnown RBP6.66□□□□□ -1.34
USP39-216ENST00000490193 OR6C68A6NDL8 312 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 UNC119BA6NIH7 251 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 ANKRD30BLA7E2S9 258 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 K7EIL1 84 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 CXCR6O00574 342 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 CHST1O43916 411 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 EDF1O60869 148 aaKnown RBP6.65□□□□□ -1.34
USP39-216ENST00000490193 ZNF682O95780 498 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 H1F0P07305 194 aaKnown RBP6.65□□□□□ -1.34
USP39-216ENST00000490193 VSIG10L2P0DP72 767 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 TROVE2P10155 538 aaKnown RBP eCLIP6.65□□□□□ -1.34
USP39-216ENST00000490193 SELLP14151 372 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 HIST1H1CP16403 213 aaKnown RBP6.65□□□□□ -1.34
USP39-216ENST00000490193 SLC6A6P31641 620 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 CSNK2BP67870 215 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 MXRA7P84157 204 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 KLF10Q13118 480 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 IKZF1Q13422 519 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 BLMHQ13867 455 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 MAPRE2Q15555 327 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 LY6EQ16553 131 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 NSUN5P1Q3KNT7 163 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 C11orf87Q6NUJ2 197 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 DPY19L4Q7Z388 723 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 ARPINQ7Z6K5 226 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 ZDHHC21Q8IVQ6 265 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 CYB561A3Q8NBI2 242 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 OR5D13Q8NGL4 314 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 OR4C15Q8NGM1 316 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 OR9Q1Q8NGQ5 310 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 OR10Z1Q8NGY1 313 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 OR8S1Q8NH09 359 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 FANK1Q8TC84 345 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 PIFOQ8TCI5 191 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 C17orf50Q8WW18 174 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 DYDC1Q8WWB3 177 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 H1FXQ92522 213 aaKnown RBP6.65□□□□□ -1.34
USP39-216ENST00000490193 R3HDM4Q96D70 268 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 SEH1LQ96EE3 360 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 MED30Q96HR3 178 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 HSH2DQ96JZ2 352 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 DHRS1Q96LJ7 313 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 GAFA1Q96PS6 74 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 RAB3IPQ96QF0 476 aaPredicted RBP6.65□□□□□ -1.34
USP39-216ENST00000490193 TMEM120AQ9BXJ8 343 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 CDCA4Q9BXL8 241 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 KRTAP17-1Q9BYP8 105 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 WNT10AQ9GZT5 417 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 OR52D1Q9H346 318 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 ZNF702PQ9H963 129 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 KRCC1Q9NPI7 259 aaPredicted RBP6.65□□□□□ -1.34
USP39-216ENST00000490193 RPRD1BQ9NQG5 326 aaKnown RBP6.65□□□□□ -1.34
USP39-216ENST00000490193 CMTM6Q9NX76 183 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 HAO2Q9NYQ3 351 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 DNAJB11Q9UBS4 358 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 CAPN7Q9Y6W3 813 aa6.65□□□□□ -1.34
USP39-216ENST00000490193 TRBV23-1A0A0A0MS06 115 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 A0A0G2JND7 137 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 TRBV4-1A0A0J9YWV2 114 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 NKX6-3A6NJ46 265 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 VGLL3A8MV65 326 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 SIGLEC5O15389 551 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 IDH3BO43837 385 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 MPIG6BO95866 241 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 HLA-DQA2P01906 255 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 CD28P10747 220 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 PSKH1P11801 424 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 ZNF823P16415 610 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 RHCEP18577 417 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 GSK3BP49841 420 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 FAM3AP98173 230 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 SPIBQ01892 262 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 SEC23BQ15437 767 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 DGUOKQ16854 277 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 FGD3Q5JSP0 725 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 FKBP9P1Q75LS8 142 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 SLC16A9Q7RTY1 509 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 LYG1Q8N1E2 194 aa6.64□□□□□ -1.35
USP39-216ENST00000490193 SDR9C7Q8NEX9 313 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms