RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 IGHV3OR15-7A0A075B7D8 119 aa19.1■□□□□ 0.65
COL9A3-213ENST00000489045 TIPRLO75663 272 aa19.1■□□□□ 0.65
COL9A3-213ENST00000489045 MTNR1AP48039 350 aa19.1■□□□□ 0.65
COL9A3-213ENST00000489045 CSNK2BP67870 215 aa19.1■□□□□ 0.65
COL9A3-213ENST00000489045 AWAT1Q58HT5 328 aa19.1■□□□□ 0.65
COL9A3-213ENST00000489045 TEX36Q5VZQ5 186 aa19.1■□□□□ 0.65
COL9A3-213ENST00000489045 CD276Q5ZPR3 534 aa19.1■□□□□ 0.65
COL9A3-213ENST00000489045 OR1M1Q8NGA1 313 aa19.1■□□□□ 0.65
COL9A3-213ENST00000489045 LRRC29Q8WV35 223 aa19.1■□□□□ 0.65
COL9A3-213ENST00000489045 TEX12Q9BXU0 123 aa19.1■□□□□ 0.65
COL9A3-213ENST00000489045 CADM1Q9BY67 442 aaKnown RBP19.1■□□□□ 0.65
COL9A3-213ENST00000489045 RASSF4Q9H2L5 321 aa19.1■□□□□ 0.65
COL9A3-213ENST00000489045 ZMAT3Q9HA38 289 aaKnown RBP19.1■□□□□ 0.65
COL9A3-213ENST00000489045 RNPEPL1Q9HAU8 725 aa19.1■□□□□ 0.65
COL9A3-213ENST00000489045 PAPOLBQ9NRJ5 636 aaKnown RBP19.1■□□□□ 0.65
COL9A3-213ENST00000489045 GSC2O15499 205 aa19.09■□□□□ 0.65
COL9A3-213ENST00000489045 CRISP1P54107 249 aa19.09■□□□□ 0.65
COL9A3-213ENST00000489045 PSMA6P60900 246 aaKnown RBP19.09■□□□□ 0.65
COL9A3-213ENST00000489045 POU4F2Q12837 409 aa19.09■□□□□ 0.65
COL9A3-213ENST00000489045 APOFQ13790 326 aa19.09■□□□□ 0.65
COL9A3-213ENST00000489045 SNCBQ16143 134 aa19.09■□□□□ 0.65
COL9A3-213ENST00000489045 SNAPC1Q16533 368 aa19.09■□□□□ 0.65
COL9A3-213ENST00000489045 WDR82Q6UXN9 313 aa19.09■□□□□ 0.65
COL9A3-213ENST00000489045 FTMTQ8N4E7 242 aa19.09■□□□□ 0.65
COL9A3-213ENST00000489045 DNAJC9Q8WXX5 260 aa19.09■□□□□ 0.65
COL9A3-213ENST00000489045 NRBF2Q96F24 287 aa19.09■□□□□ 0.65
COL9A3-213ENST00000489045 TVP23BQ9NYZ1 205 aa19.09■□□□□ 0.65
COL9A3-213ENST00000489045 LAMP5Q9UJQ1 280 aa19.09■□□□□ 0.65
COL9A3-213ENST00000489045 LRP12Q9Y561 859 aa19.09■□□□□ 0.65
COL9A3-213ENST00000489045 MDFIC2A0A1B0GVS7 189 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 FCN3O75636 299 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 HKR1P10072 659 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 ALOX5APP20292 161 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 ACKR3P25106 362 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 HCCSP53701 268 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 FAHD1Q6P587 224 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 BRD3OSQ6XYD6 125 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 KRT77Q7Z794 578 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 OR8B12Q8NGG6 310 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 UTP4Q969X6 686 aaKnown RBP19.08■□□□□ 0.64
COL9A3-213ENST00000489045 ITPKCQ96DU7 683 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 LYZL4Q96KX0 146 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 MICU1Q9BPX6 476 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 PCGF1Q9BSM1 259 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 NIPAL2Q9H841 368 aa19.08■□□□□ 0.64
COL9A3-213ENST00000489045 ANXA2P2A6NMY6 339 aa19.07■□□□□ 0.64
COL9A3-213ENST00000489045 ZNF879B4DU55 563 aa19.07■□□□□ 0.64
COL9A3-213ENST00000489045 DVL1O14640 695 aa19.07■□□□□ 0.64
COL9A3-213ENST00000489045 SFTPBP07988 381 aa19.07■□□□□ 0.64
COL9A3-213ENST00000489045 RNASE1P07998 156 aaKnown RBP19.07■□□□□ 0.64
COL9A3-213ENST00000489045 MRPL3P09001 348 aaKnown RBP19.07■□□□□ 0.64
COL9A3-213ENST00000489045 CFHR2P36980 270 aa19.07■□□□□ 0.64
COL9A3-213ENST00000489045 DAPP51397 102 aa19.07■□□□□ 0.64
COL9A3-213ENST00000489045 IL5RAQ01344 420 aa19.07■□□□□ 0.64
COL9A3-213ENST00000489045 PRDX4Q13162 271 aa19.07■□□□□ 0.64
COL9A3-213ENST00000489045 SLC9A3R2Q15599 337 aa19.07■□□□□ 0.64
COL9A3-213ENST00000489045 RTL8AQ9BWD3 113 aa19.07■□□□□ 0.64
COL9A3-213ENST00000489045 YIPF3Q9GZM5 350 aa19.07■□□□□ 0.64
COL9A3-213ENST00000489045 TLNRD1Q9H1K6 362 aa19.07■□□□□ 0.64
COL9A3-213ENST00000489045 KAAG1Q9UBP8 84 aa19.07■□□□□ 0.64
COL9A3-213ENST00000489045 MPC1Q9Y5U8 109 aa19.07■□□□□ 0.64
COL9A3-213ENST00000489045 CCDC182A6NF36 153 aa19.06■□□□□ 0.64
COL9A3-213ENST00000489045 ZNF850A8MQ14 1090 aa19.06■□□□□ 0.64
COL9A3-213ENST00000489045 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-213ENST00000489045 CDIPTO14735 213 aa19.06■□□□□ 0.64
COL9A3-213ENST00000489045 TMPRSS2O15393 492 aa19.06■□□□□ 0.64
COL9A3-213ENST00000489045 LIPFP07098 398 aa19.06■□□□□ 0.64
COL9A3-213ENST00000489045 ELF3P78545 371 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-213ENST00000489045 MICBQ29980 383 aa19.06■□□□□ 0.64
COL9A3-213ENST00000489045 GPR157Q5UAW9 335 aa19.06■□□□□ 0.64
COL9A3-213ENST00000489045 GALNT4Q8N4A0 578 aa19.06■□□□□ 0.64
COL9A3-213ENST00000489045 PNLDC1Q8NA58 520 aaKnown RBP19.06■□□□□ 0.64
COL9A3-213ENST00000489045 SLC25A28Q96A46 364 aa19.06■□□□□ 0.64
COL9A3-213ENST00000489045 TEAD3Q99594 435 aa19.06■□□□□ 0.64
COL9A3-213ENST00000489045 A0A1B0GW55 424 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 CLDN34H7C241 214 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 PSMD9O00233 223 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 TOX4O94842 621 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 CST4P01036 141 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 DUX4L2P0CJ85 424 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 DUX4L3P0CJ86 424 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 DUX4L4P0CJ87 422 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 DUX4L5P0CJ88 424 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 DUX4L6P0CJ89 424 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 DUX4L7P0CJ90 424 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 MMP9P14780 707 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 MUC1P15941 1255 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-213ENST00000489045 FOXL1Q12952 345 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 BNIP1Q12981 228 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 PTGES3Q15185 160 aaKnown RBP19.05■□□□□ 0.64
COL9A3-213ENST00000489045 DEFB112Q30KQ8 113 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 WDR38Q5JTN6 314 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 LCN1P1Q5VSP4 162 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 RUSC1-AS1Q66K80 236 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 DUX4L9Q6RFH8 374 aaPredicted RBP19.05■□□□□ 0.64
COL9A3-213ENST00000489045 BTN2A1Q7KYR7 527 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 OR5K1Q8NHB7 308 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 OR5P3Q8WZ94 311 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 ST8SIA4Q92187 359 aa19.05■□□□□ 0.64
COL9A3-213ENST00000489045 SEH1LQ96EE3 360 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms