RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 TECTBQ96PL2 329 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 NUDT16L1Q9BRJ7 211 aaKnown RBP11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 PAPOLGQ9BWT3 736 aaKnown RBP11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 BRD7Q9NPI1 651 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 ENOPH1Q9UHY7 261 aa11.52□□□□□ -0.57
SPTLC1-207ENST00000488921 KIR2DS1A0A191URI9 304 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 C3orf80F5H4A9 247 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 H3BNX3 289 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 CD80P33681 288 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 IL5RAQ01344 420 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 RCN1Q15293 331 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 KLF17Q5JT82 389 aaPredicted RBP11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 TMEM236Q5W0B7 351 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 SFRP4Q6FHJ7 346 aaPredicted RBP11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 LYPD2Q6UXB3 125 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 DOK3Q7L591 496 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 KRT77Q7Z794 578 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 AMIGO2Q86SJ2 522 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 ZDHHC13Q8IUH4 622 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 PQLC1Q8N2U9 271 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 C19orf18Q8NEA5 215 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 BBS1Q8NFJ9 593 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 GCDHQ92947 438 aaPredicted RBP11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 DACT3Q96B18 629 aaPredicted RBP11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 UPRTQ96BW1 309 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 MICU1Q9BPX6 476 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 YIPF3Q9GZM5 350 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 MS4A7Q9GZW8 240 aaPredicted RBP11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 RNPEPL1Q9HAU8 725 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 KRT84Q9NSB2 600 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 TVP23BQ9NYZ1 205 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 LRP12Q9Y561 859 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 MPC1Q9Y5U8 109 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 TMEM14AQ9Y6G1 99 aa11.51□□□□□ -0.57
SPTLC1-207ENST00000488921 TRAV40A0A0B4J280 105 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 G3V2T6 193 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 ADAM20O43506 726 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 LIPFP07098 398 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 ALOX5APP20292 161 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 MTNR1AP48039 350 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 COMPP49747 757 aaPredicted RBP11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 DAPP51397 102 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 UBA52P62987 128 aaKnown RBP11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 PTGES3Q15185 160 aaKnown RBP11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 TUSC1Q2TAM9 212 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 C11orf91Q3C1V1 193 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 DEGS2Q6QHC5 323 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 ZNF841Q6ZN19 808 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 GCSAMQ8N6F7 178 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 SIGLECL1Q8N7X8 197 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 ZDHHC22Q8N966 263 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 OR1M1Q8NGA1 313 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 ITFG2Q969R8 447 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 PKP2Q99959 881 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 RTL8AQ9BWD3 113 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 MROQ9BYG7 248 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 SEMA6AQ9H2E6 1030 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 ZNF69Q9UC07 566 aa11.5□□□□□ -0.57
SPTLC1-207ENST00000488921 TMEM89A2RUT3 159 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 ACOD1A6NK06 481 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 TMEM210A6NLX4 147 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 LHBP01229 141 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 MUC1P15941 1255 aaPredicted RBP11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 DCTDP32321 178 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 BPIFB3P59826 476 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 RIPK1Q13546 671 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 MICBQ29980 383 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 TEX36Q5VZQ5 186 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 ZNF826PQ6ZT77 177 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 C9orf139Q6ZV77 190 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 GALNT4Q8N4A0 578 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 PNLDC1Q8NA58 520 aaKnown RBP11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 OR8B12Q8NGG6 310 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 LRRC29Q8WV35 223 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 ASB17Q8WXJ9 295 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 ITPKCQ96DU7 683 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 CNN2Q99439 309 aaKnown RBP11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 TEAD3Q99594 435 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 ESM1Q9NQ30 184 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 ZNF319Q9P2F9 582 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 CTSZQ9UBR2 303 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 KLHDC2Q9Y2U9 406 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 RHBDD3Q9Y3P4 386 aa11.49□□□□□ -0.57
SPTLC1-207ENST00000488921 A0A0U1RQV5 110 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 SLC22A31A6NKX4 558 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 C22orf46C9J442 243 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 TMPRSS2O15393 492 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 ZNF254O75437 659 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 ECDO95905 644 aaPredicted RBP11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 PLATP00750 562 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 CST4P01036 141 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 GYPAP02724 150 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 MRPL3P09001 348 aaKnown RBP11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 IGHV4-38-2P0DP08 117 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 PRTN3P24158 256 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 BAMBIQ13145 260 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 PRDX4Q13162 271 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 ZNF829Q3KNS6 432 aaPredicted RBP11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 GPR157Q5UAW9 335 aa11.48□□□□□ -0.57
SPTLC1-207ENST00000488921 WDR82Q6UXN9 313 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms