RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 TMEM231Q9H6L2 316 aa12.12□□□□□ -0.47
COPS7B-221ENST00000488111 DKKL1Q9UK85 242 aa12.12□□□□□ -0.47
COPS7B-221ENST00000488111 TRBV5-7A0A0A0MS05 114 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 CBR3O75828 277 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 SP1P08047 785 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 TPT1P13693 172 aaKnown RBP12.11□□□□□ -0.47
COPS7B-221ENST00000488111 ZNF44P15621 663 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 PLA2G5P39877 138 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 APOBEC1P41238 236 aaKnown RBP12.11□□□□□ -0.47
COPS7B-221ENST00000488111 ACTBP60709 375 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 ACTG1P63261 375 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 NKAPLQ5M9Q1 402 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 UNQ6126/PRO20091Q6UXV3 157 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 PAQR4Q8N4S7 273 aaPredicted RBP12.11□□□□□ -0.47
COPS7B-221ENST00000488111 INO80EQ8NBZ0 244 aaPredicted RBP12.11□□□□□ -0.47
COPS7B-221ENST00000488111 MDS2Q8NDY4 140 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 OR2M7Q8NG81 312 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 HAS2Q92819 552 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 SMCO4Q9NRQ5 59 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 RYDENQ9NUL5 291 aaKnown RBP12.11□□□□□ -0.47
COPS7B-221ENST00000488111 GHRLQ9UBU3 117 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 TRAV8-7A0A075B6U6 113 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 TRBV23-1A0A0A0MS06 115 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 A8MVM7 634 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 WRBO00258 174 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 CCSO14618 274 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 ZIC3O60481 467 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 TRAPPC6AO75865 159 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 RAB3DO95716 219 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 SOX2P48431 317 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 CAPZA1P52907 286 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 DSCR4P56555 118 aaPredicted RBP12.11□□□□□ -0.47
COPS7B-221ENST00000488111 SSTP61278 116 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 FOXO1Q12778 655 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 ALKBH1Q13686 389 aaKnown RBP12.11□□□□□ -0.47
COPS7B-221ENST00000488111 ZNF74Q16587 644 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 GFOD2Q3B7J2 385 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 RAET1LQ5VY80 246 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 YRDCQ86U90 279 aaKnown RBP12.11□□□□□ -0.47
COPS7B-221ENST00000488111 JAZF1Q86VZ6 243 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 SEC22AQ96IW7 307 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 MRGPRX4Q96LA9 322 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 MNTQ99583 582 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 PAPOLGQ9BWT3 736 aaKnown RBP12.11□□□□□ -0.47
COPS7B-221ENST00000488111 PLEKHA6Q9Y2H5 1048 aa12.11□□□□□ -0.47
COPS7B-221ENST00000488111 NOP16Q9Y3C1 178 aaKnown RBP12.11□□□□□ -0.47
COPS7B-221ENST00000488111 PSMD9O00233 223 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 UPK3AO75631 287 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 ZNF735P0CB33 412 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 FAM157CP0CG43 387 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 RCC1P18754 421 aaPredicted RBP12.1□□□□□ -0.47
COPS7B-221ENST00000488111 AGAP20933 346 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 PNLIPRP3Q17RR3 467 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 C1orf140Q5VVS0 124 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 DRAM2Q6UX65 266 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 LILRB2Q8N423 598 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 OR5AK2Q8NH90 309 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 Q96M85 177 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 FAM173AQ9BQD7 235 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 NMNAT2Q9BZQ4 307 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 SLC17A5Q9NRA2 495 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 RAXQ9Y2V3 346 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 IER3IP1Q9Y5U9 82 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 MGAQ8IWI9 3026 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 BLOC1S5-TXNDC5H3BN57 136 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 ETV2O00321 342 aaPredicted RBP12.1□□□□□ -0.47
COPS7B-221ENST00000488111 NDUFB2O95178 105 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 MAS1P04201 325 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 GDF1P27539 372 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 SFTPDP35247 375 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 PRKXP51817 358 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 SLC25A53Q5H9E4 307 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 BAP18Q8IXM2 172 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 ZNF561Q8N587 486 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 NPEPL1Q8NDH3 523 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 OR51D1Q8NGF3 324 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 ZNF417Q8TAU3 575 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 HIST1H2BAQ96A08 127 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 ZBTB8AQ96BR9 441 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 SSUH2Q9Y2M2 353 aa12.1□□□□□ -0.47
COPS7B-221ENST00000488111 URB1O60287 2271 aaKnown RBP12.09□□□□□ -0.47
COPS7B-221ENST00000488111 CPAMD8Q8IZJ3 1885 aa12.09□□□□□ -0.47
COPS7B-221ENST00000488111 ACACAQ13085 2346 aa12.09□□□□□ -0.47
COPS7B-221ENST00000488111 MED12Q93074 2177 aa12.09□□□□□ -0.47
COPS7B-221ENST00000488111 TRAV36DV7A0A075B6V5 113 aa12.09□□□□□ -0.47
COPS7B-221ENST00000488111 TEX13DA0A0J9YY54 714 aaPredicted RBP12.09□□□□□ -0.47
COPS7B-221ENST00000488111 FAM166BA8MTA8 275 aa12.09□□□□□ -0.47
COPS7B-221ENST00000488111 SMAD9O15198 467 aaKnown RBP12.09□□□□□ -0.47
COPS7B-221ENST00000488111 RRP8O43159 456 aaKnown RBP12.09□□□□□ -0.47
COPS7B-221ENST00000488111 NPIPB7O75200 414 aa12.09□□□□□ -0.47
COPS7B-221ENST00000488111 CD14P08571 375 aa12.09□□□□□ -0.47
COPS7B-221ENST00000488111 CD46P15529 392 aa12.09□□□□□ -0.47
COPS7B-221ENST00000488111 MUC1P15941 1255 aaPredicted RBP12.09□□□□□ -0.47
COPS7B-221ENST00000488111 ZBTB25P24278 435 aa12.09□□□□□ -0.47
COPS7B-221ENST00000488111 SDHAP31040 664 aa12.09□□□□□ -0.47
COPS7B-221ENST00000488111 TLE3Q04726 772 aa12.09□□□□□ -0.47
COPS7B-221ENST00000488111 ZNF766Q5HY98 468 aa12.09□□□□□ -0.47
COPS7B-221ENST00000488111 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.09□□□□□ -0.47
COPS7B-221ENST00000488111 TMEM200AQ86VY9 491 aa12.09□□□□□ -0.47
COPS7B-221ENST00000488111 OR14L1PQ8NHC6 308 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms